Lodderomyces beijingensis: 92211026
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Entry
92211026 CDS
T10315
Symbol
LODBEIA_P58300
Name
(RefSeq) uncharacterized protein
KO
K10755
replication factor C subunit 2/4
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03030
DNA replication
lbg03410
Base excision repair
lbg03420
Nucleotide excision repair
lbg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
92211026 (LODBEIA_P58300)
03410 Base excision repair
92211026 (LODBEIA_P58300)
03420 Nucleotide excision repair
92211026 (LODBEIA_P58300)
03430 Mismatch repair
92211026 (LODBEIA_P58300)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbg03032
]
92211026 (LODBEIA_P58300)
03036 Chromosome and associated proteins [BR:
lbg03036
]
92211026 (LODBEIA_P58300)
03400 DNA repair and recombination proteins [BR:
lbg03400
]
92211026 (LODBEIA_P58300)
DNA replication proteins [BR:
lbg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
92211026 (LODBEIA_P58300)
DNA Replication Termination Factors
ELG1-RFC complex
92211026 (LODBEIA_P58300)
Chromosome and associated proteins [BR:
lbg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
92211026 (LODBEIA_P58300)
DNA repair and recombination proteins [BR:
lbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
92211026 (LODBEIA_P58300)
Check point factors
HRAD17(Rad24)-RFC complex
92211026 (LODBEIA_P58300)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
AAA_11
Mg_chelatase
AAA_16
RuvB_N
AAA_24
ResIII
AAA_14
SLFN-g3_helicase
AAA_5
AAA_7
DUF815
AAA_19
AAA_28
AAA_30
AAA_2
bpMoxR
AAA_23
AAA_assoc_2
nSTAND3
RNA_helicase
ATPase_2
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
92211026
NCBI-ProteinID:
XP_066832768
LinkDB
All DBs
Position
8:153447..154523
Genome browser
AA seq
358 aa
AA seq
DB search
MTTYEEEKLHHTPWVEKYRPRNLDDVASQDHAIRVLKKQTATQNLPHMLFYGPPGTGKTS
TILALAKQLFGPRLYKSRVLELNASDERGISIVRQKIKNFAKLSVSNATADDLAHYPCPP
YKIIILDEADSMTNDAQSALRRTMETYASITRFALVCNYITRIIDPLASRCSKFRFKLLN
EENSLNRLKYIAAEEQLHLDTASGTDAVLSEVLKISNGDLRKAITFLQSASKLSTSLKLD
GDNVDNRDGGDVGVITKESIRETAGILPDALIAELVETIKSHNNVKLIAMVNDIILSGWS
AQQLIDQLHEYLILDDSINSLTKNQIALSLFDTDKKLNYGTDEHIQLLNLVLQVSKVV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatacgaagaagagaaactccaccacacgccatgggtagagaagtaccgtccg
cgcaacttagacgacgtggcctcgcaagaccacgccatccgcgtcctcaagaagcaaacc
gctacgcagaacttgccccacatgctcttctacggcccgcccggcaccggcaagacgtca
accatcctcgccctcgcaaaacaactctttgggccccgattgtacaaatcacgcgtgttg
gaattgaacgccagtgacgagcgcgggatctccatcgtgcgtcagaaaatcaagaacttt
gccaagctaagcgtgagcaacgccaccgccgatgatttagcccactatccgtgtccaccg
tacaagatcatcattttggacgaggcggactcgatgactaacgacgcgcagagcgcgtta
cggagaacgatggagacgtacgcgagcatcacgcgcttcgcgttggtgtgcaactacatc
acgcgcatcatcgaccccttggcttcgcggtgctccaagttcagattcaagttgttgaac
gaggagaactcgttgaaccggttaaagtatatcgcggcggaagaacagttgcatttggac
acggccctgggcacggatgccgtgttgagcgaggtgttgaagatcagtaacggcgatttg
agaaaggcaattaccttcttgcagagtgcttcgaaattgagcacgagtttgaaattggat
ggtgataacgtggacaatagagatggtggtgacgttggggtgattaccaaggaatcgatc
cgggaaaccgctggcatcttgcccgatgcgttgatagccgagttggtcgagacgataaag
agccataacaacgttaagctcatcgccatggtcaacgacatcatcttgagcggttggagc
gcacaacaactaattgaccaactacatgaatatttgatcttggacgactctataaactcg
ctaaccaaaaatcaaattgctttactgttgttcgatacggataagaaactaaactacggt
accgatgaacatatccaattgctcaatttggttctccaagtttctaaagttgtatag
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