Lodderomyces beijingensis: 92211034
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Entry
92211034 CDS
T10315
Symbol
LODBEIA_P58380
Name
(RefSeq) uncharacterized protein
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
92211034 (LODBEIA_P58380)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbg03009
]
92211034 (LODBEIA_P58380)
Ribosome biogenesis [BR:
lbg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
92211034 (LODBEIA_P58380)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
Beta-prop_HPS5
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
RMC1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
PRC_RimM
Motif
Other DBs
NCBI-GeneID:
92211034
NCBI-ProteinID:
XP_066832776
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Position
8:complement(175260..176933)
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AA seq
557 aa
AA seq
DB search
MVKNRDGDEVEIPPKDEEEMMLEKLVFGDIEGLQNRLRKIDNLFDYSDAEDVGEGLSESD
DESEDLDGVQDEDLFYIDEGNADVSGEEMDVDRASSTEDEDGDEDGEEGEDNAWEDSDDD
KLNISLTASDRLRKLRKTPQDTQISGRAYVTRLRGQFEKIYPRPEWADRFDEPRGEDADS
SDDDIMIGGEEDEEDGSGATPASLSRLLSTTHQFLTTKQLKLISPTRISITRLKDATYQK
LSKAAIQAISFHPTHSILLTAGFDKTIRLYQIDGKTNNFMTSYFLRNCPIMACQFLPQPD
QNMIYAAGRRKYMNKINLNTGEVEKISRMYGHEQQQKSFESFKISSGGKFIGMVGNSGWF
NLVNAATGQWIKGFKIEGTVVDFDFAYDESFVAVVNSAGDVWEFELLGKLSSKSENKTIR
KWSDDGGVGITRIKLGGWNSSRWVAIGSNNGIVNLYDRSTFTSDKISPKPFKTVENLVTS
ISSLVFNADGQLLAIASRGKRDAFKLVHLPSGSVYSNWPTSGTPLGKVTSVAFSPNNEIL
AVGNEAGKVTLWRLNHY
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggttaagaacagggacggagacgaggtggagataccgcccaaggacgaggaggagatg
atgttggagaaattggtgtttggagacattgaggggctccagaacaggttgaggaagatc
gataatctctttgattacagtgatgctgaagacgttggcgagggtctcagcgagagcgac
gacgagagtgaggacttggacggcgtgcaggacgaggacttgttttatattgatgaggga
aacgccgatgtttctggtgaagaaatggacgtggatagagcatccagcaccgaggatgaa
gatggagatgaagatggggaggagggtgaggataatgcgtgggaggatagcgatgacgac
aagctcaatatttcacttacggcgtcggataggctaaggaagttgaggaaaacgccgcag
gatactcagatctcgggaagagcctacgtcacgaggctacgtgggcaatttgaaaagata
tatccacggccagaatgggcagatcgttttgatgagccacgaggggaagatgcagatagt
tccgatgacgatattatgataggtggagaggaagacgaagaggacgggtcaggagctact
cccgcttcactctcgcgtctcctttcaacaacgcaccaattcctcaccacgaaacaactc
aaactcatctcaccaacacgcatttccatcacgcggttgaaagatgcaacctaccagaaa
ttgtccaaagccgccatccaggccatttcattccatccaacgcactcgattctcctcact
gccgggttcgacaagacgatacgactctaccaaatcgacggcaagaccaacaatttcatg
acctcgtacttcttgcgcaactgccccatcatggcgtgccagttcttgccgcagccggac
caaaacatgatctatgctgccggaaggaggaaatacatgaataaaatcaatttgaacacg
ggagaagttgagaagattagtcgtatgtacggacatgagcagcagcagaagtcgtttgag
agcttcaaaatcagcagcgggggcaagttcatcggcatggttggtaattcggggtggttc
aacttggtcaatgctgctacggggcagtggatcaaaggtttcaagattgaaggcactgtt
gtggactttgattttgcttacgatgagagctttgtcgcggtggtgaactcagcgggcgac
gtttgggagtttgagctcttgggcaagttgagctcgaaaagcgaaaacaagactatacgc
aagtggtccgatgacggcggcgtggggatcaccaggataaagttgggaggctggaacagc
agcaggtgggtcgctatcgggtcgaataacgggatcgtgaacttgtacgaccgatcgaca
tttaccctggacaaaatactgcccaagcccttcaagacggtggagaatttggtcacctcc
atctcctcgcttgtcttcaacgccgatggccagctacttgccattgcctcgaggggcaag
cgcgatgcgttcaagttggtgcatcttccctcggggtcggtgtatagcaactggcccact
agcggaacgccgttgggcaaagtcaccagcgttgccttttcgccaaataacgaaattttg
gcggtcgggaacgaggccggtaaggtgacgctctggagattgaaccattactag
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