Lodderomyces beijingensis: 92211112
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Entry
92211112 CDS
T10315
Symbol
LODBEIA_P59160
Name
(RefSeq) uncharacterized protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
92211112 (LODBEIA_P59160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbg03019
]
92211112 (LODBEIA_P59160)
Messenger RNA biogenesis [BR:
lbg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
92211112 (LODBEIA_P59160)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
92211112
NCBI-ProteinID:
XP_066832854
LinkDB
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Position
8:complement(434181..435197)
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AA seq
338 aa
AA seq
DB search
MFNTASSHGKLPDYSNRPIPNFGQEPALQPNMALNDEQIYQWISELVSSSNREKALLELG
KKREQYDDLALVLWNSFGVITVLLEEIISVYPYLDPPNLTASASNRVCNALALLQCVASS
VQTRGLFLNANLPLYLYPFLSTNARQRSFEYLRLTSLGVIGALVKNDTPEVINFLLSTEI
VPLCLNIMEISSELSKTVAIFILQKILLDDQGLSYVCTTFERFHTVASVLAKMVDQLSAT
TKVGALGGQNQQMQAQPPQGQGPGQTAASASSSSNSSGRLLKHVIRCYMRLSDNMEARKA
LGSVLPEPLRDGTFSAILHDDAATKRCLAQLLSNINEQ
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatacggcaagcagccacgggaagttgcccgactactccaaccggcccattcca
aactttgggcaagagccggctcttcagcccaacatggcactaaacgacgagcagatctac
caatggatctcggagcttgtgtctagtctgaatagagaaaaggcgcttttggagttgggc
aagaaaagagagcagtacgatgacttggcgctcgtgttgtggaactcgtttggggtgata
acggtgttgttggaggagatcatcagcgtgtatccgtacttggacccacccaacttgacg
gcgtcggcgtccaacagggtgtgcaacgcgttggctctccttcagtgtgtggcctcgagc
gtgcagacccgcgggttgtttttgaatgcaaacttgccgttatacctctaccctttcctt
tccaccaatgcccggcaacggtcctttgagtacttgaggttgacgagcttgggtgtcatt
ggagccttggtgaagaacgataccccggaagtgataaatttcctactaagtaccgagatt
gtgccgctttgcctcaacatcatggagatttcctcggagttgtccaagacggttgctatt
tttattttgcaaaaaatcttgctcgacgaccaagggttgagctatgtctgcacaacgttt
gaaagatttcataccgtggcgtccgtgttggccaagatggttgatcagctcagcgcaacc
actaaagttggcgctcttggtggccagaaccaacagatgcaagcccagccaccgcagggc
caaggtcccggtcaaaccgcggcgtcggcgtcgtcgtcgtctaacagctctggccgttta
ctcaagcatgtcattaggtgctacatgaggttgtcggacaatatggaagctcgaaaggca
ttgggcagtgtgttgccggagccgttgcgcgatggcaccttctcggcgatattgcacgat
gatgcggccaccaagaggtgtttagcgcagttgctaagtaacatcaatgagcaatga
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