Lodderomyces beijingensis: 92211266
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Entry
92211266 CDS
T10315
Symbol
LODBEIA_P60700
Name
(RefSeq) uncharacterized protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
92211266 (LODBEIA_P60700)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbg03019
]
92211266 (LODBEIA_P60700)
Messenger RNA biogenesis [BR:
lbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
92211266 (LODBEIA_P60700)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
HBS1_N
MMR_HSR1
GTP_EFTU_D3
Roc
GTP_EFTU_D2
GTP_EFTU_D4
DUF4192
Motif
Other DBs
NCBI-GeneID:
92211266
NCBI-ProteinID:
XP_066833008
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Position
8:complement(join(783263..785370,785531..785768))
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AA seq
781 aa
AA seq
DB search
MDYDEDELDYQSHDEVDEFDEDKLANDEYDLMHEQLAHLKSKLKSYNPEIPEIDLKEALY
FNYFELEPSIEELKAKFKPTQLAKQRAQQRELEQQQQQLEDGNIQKNERNEGSDGLSTPG
KPLSKLAALARSRSRQAPPSDRRHSILDQFTSGVPSSAASSLSKSTPSILNRKRTERAPV
DTSTASQLEQEQKKLKVPAISYDIQVDNSMMTISAPSEGVSVFWFPDRSLVPASENEQKR
RRLYNSLFEPITNFDIPTEKISASKESFIKPSPDDQVLNAQKQAFEGVGKLQINEQSQNN
NKPTAKEKNPKLKDTKPFKKIDVAREIATNPSYAKPHKSFVVIGHVDAGKSTLMGRLLFD
FGIVDAKTVNKLVKESERLGKGSFALAWIMDQTEEERSHGVTVDICATDFEIESTKFTAI
DAPGHKDFVPQMVSGVSNADFALLVVDSITGEFEAGFALDGQTKEHTILAKNLGVEKICV
VVNKMDKEDWSQDRYEAIKEQMMEYMTSPDVDFKPEQIDFVPISGLTGDNVVKRNASATT
STPMKFDWYKGPTLGQYLEQVSLDSQPSRDQIHAEPFYLSVSDVYKDKGELKVIGKINSG
CIQSGETVIAYPSEESLQVQSIKVAQTAVDFAISGQLVTLHFKTSQLSNEAVDPIRVGDV
VAKTVASPISSVKKFTASLHLFNMDKPLLVGMPFVLFRNSTQAAARISRIVEITTNSSMT
KQKKKKNILHLTSKQTAIVEIEVDGGESLPLTTYKDNAKLGRIVIRRQGSTIGAGQVLSL
E
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggactacgatgaagacgagctagattatcagtctcacgatgaagtcgatgaattcgac
gaggacaagctcgcaaacgacgaatacgacctcatgcacgagcagctcgcacatctcaaa
tctaagctcaagtcttacaaccctgagatacccgagatagatctcaaggaagcgctttat
ttcaactactttgaactagaaccttcgatcgaggagctcaaggcaaagttcaagccaaca
caattggcgaagcaaagggcccagcagcgggagttggaacagcagcagcaacaactagag
gatgggaatattcaaaaaaatgaaaggaacgagggcagcgatggactttctacaccgggg
aaaccattgtcgaaacttgcagccttggcaagatctcgatctagacaagccccgccatca
gaccggcgccattcaatcctagaccaattcaccagcggtgtgccgtcgagcgcagcaagc
ctgctatcaaagtcaactccctctatactcaaccgcaaacgcacagagcgtgctccagta
gatacctcaacagcgtctcaactcgagcaagagcagaaaaaactcaaggttcccgcaatc
tcatacgatatccaagtcgacaactcaatgatgaccatctcggctcccagtgaaggtgtt
tcggtgttttggttccccgatagactgctcgtgcccgctagcgagaatgaacagaaaagg
agacgactatataattcgttgtttgagcccattactaactttgatatcccaacagaaaag
atctctgccagtaaagagagctttatcaaaccatcgccagatgaccaagtgctcaatgct
caaaagcaagcgtttgaaggcgtgggcaagttgcaaatcaacgagcaactgcaaaataat
aacaagcccaccgccaaggagaaaaacccgaaactcaaggatacaaaaccgttcaagaaa
attgacgtggcaagggagatagcgaccaacccaagctatgccaaacctcacaagtccttt
gtggtcattggccatgtcgatgcaggcaaatcgacactaatgggccggcttctctttgac
tttggcatcgttgatgcaaaaacggtgaacaagttggttaaagaaagtgaaagattgggc
aaaggctcatttgcattagcttggatcatggatcagactgaggaggagagaagtcacggg
gtcacagtcgacatttgtgccaccgatttcgaaattgaatctacgaaattcacagccatt
gatgcaccgggacacaaggactttgtgccgcagatggtcagcggcgtgtccaatgccgat
ttcgcgttgctcgtggtggactccatcacgggtgaatttgaagctggctttgcgttggac
ggacaaacaaaagaacatacaatcttggccaagaacttgggcgtggaaaagatctgcgtg
gttgttaacaagatggacaaggaagattggagccaagatcggtacgaggcgataaaagag
caaatgatggagtacatgacgagtcccgatgttgatttcaagccagaacagattgacttt
gtgcctatttctggattgaccggtgacaacgttgttaagaggaatgcctctgcaacaacg
agtacaccaatgaagtttgattggtacaagggccccacgttgggccagtatctcgaacag
gtgtcgcttgactcgcaaccgtctagggaccaaatccacgccgagccattctatctttct
gtcagcgatgtttacaaagacaaaggcgaactcaaagtgattggcaaaatcaacagtggg
tgcatccaatctggggagaccgttattgcatacccaagcgaggaaagtttgcaagtacag
tcgatcaaggttgctcaaaccgcggttgattttgcaatcagcggccagttggtcaccctc
catttcaaaaccagtcaattgtcaaatgaggcagttgacccgataagagttggagacgtt
gtagccaaaacagttgcatcgcccataagctcagtcaagaaattcacggcatcgttgcat
ctattcaacatggacaaaccgctcttggtagggatgccgtttgtgctattcaggaacagt
actcaagcagcagcccggatctccaggattgttgaaatcacgactaactcctcaatgacc
aaacagaaaaagaagaagaatattttgcatctcacttccaagcagacggcgattgttgag
attgaggtcgatggaggcgaatccttgcccttgacaacgtataaagataatgccaaacta
ggcaggatcgtgattaggaggcaaggaagtaccatcggcgccggtcaagtcctttccttg
gagtga
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