Lentilactobacillus buchneri NRRL B-30929: Lbuc_0722
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Entry
Lbuc_0722 CDS
T01477
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lbh
Lentilactobacillus buchneri NRRL B-30929
Pathway
lbh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Lbuc_0722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbh03400
]
Lbuc_0722
Enzymes [BR:
lbh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Lbuc_0722
DNA repair and recombination proteins [BR:
lbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Lbuc_0722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
SLFN-g3_helicase
AAA_22
UvrD-helicase
HHH_5
AAA_12
AAA_28
PIF1
nSTAND3
AAA_16
RsgA_GTPase
NTPase_1
AAA
HHH
RecR_HhH
AAA_29
NPHP3_N
T2SSE
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AEB72986
LinkDB
All DBs
Position
767684..770167
Genome browser
AA seq
827 aa
AA seq
DB search
MDHSIDLFGSEQNNHEPQYVDGRLKAIFFSSNDSFYKVVLVEITETNVNWPEDEIVVTGN
FGDLVEENSYHFTGKLVDHPRYGKQFQASNYTSVIATTREGVVKYLSGDQFPGVGKKTAE
RVVDVLGDDAIEKITADNRVLDDVPISAKLRSAIIENLDADDNLEKTIVGLNSYGFSSAI
ASAIYQKYHEDALKIISDNPYQLVEDIDGISFKKADAIALRLGIVPDSNERIRAGLMYAI
DELCLQNGDTYTTTAPLIQTATSLLEGNSQQQIPGKKLAESLVELAKEGKVVGEEDRIYL
TRLYNAEVQIADHLNRVIKNQDDEDHLKEDAIKKQLRVVEKQFDINYDDSQVAAIVQAIQ
SPAFILTGGPGTGKTTIINGIVNTFARLHEYSLDINSYKDKPFPIVLAAPTGRAAKHMTE
STGLPASTIHRLLGLNGRESNDTTGTKDIEGALLIIDEMSMVDTYLFRSLVRAIPNHMQV
VLVGDQDQLPSVGPGQVFHDLLVSKQIPAMQLNTIYRQEKGSSIIQLAHDIHRGQLSENF
TQNQSDRSFIPCNEYQISSVIEQVTKRAKQKDFGLMDVQVLAPMYRGRAGIDRLNDVVQE
VWQGDPTGKKSVAIREHTYRIGDKVLQLVNNPENNVFNGDIGIIVGMDAPKGQQVPNKIT
IDFDETEVTYEKNEWTQFTLAYCTSIHKAQGSEFKMVILPIVRQFSRMLQRNLLYTAVTR
ASDFLIMLGEKEAFEQCVRNVSVNRQTSLVKRLVDTIGIQPQSKSADGEPEAEDQKQLPT
GTPSAQETDDAKADNLPDHLTTAVINQNLIDPMIGMGDVTPRDFLKS
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
ttggaccattcaatagatttatttggctcagaacagaataatcacgaaccacaatatgtc
gatggccgattaaaggcgatcttcttttcgagtaatgacagtttttataaagtcgtctta
gttgaaattacggagaccaatgtcaattggccggaagacgaaatcgtcgtcaccgggaac
tttggcgatttggttgaagaaaacagctatcatttcaccggcaaattagtcgatcatccc
cgttatggcaagcaatttcaagccagcaactacaccagtgtgatcgccactaccagagaa
ggggtcgtcaaatatttatcaggcgatcagttccccggcgttggtaagaagactgccgaa
cgggtggtggatgttcttggcgatgatgcgattgaaaagattaccgcggataaccgtgtc
ttggatgacgttcccatcagcgccaaattgcgatcggcaattattgaaaatcttgacgcc
gatgataacttggaaaagaccattgttggactgaacagctatggtttttcgagtgcgatt
gcttcggcgatttaccaaaaatatcatgaagatgctttgaaaatcatttctgataatccc
taccaattagtcgaagacattgacggcatcagcttcaaaaaagccgacgccattgccctt
cgattggggattgtgccggattccaacgaacggattcgtgccggattgatgtatgcgatt
gatgaattatgccttcaaaatggggacacatataccacaaccgccccattgattcaaact
gccacgagccttctggaggggaattcccagcagcagattcctgggaaaaagttggccgag
agtttggttgaactggctaaagaaggcaaggttgtcggcgaagaagaccgcatttattta
acccggctatacaacgccgaagtccaaattgccgatcatttgaaccgggtgatcaaaaat
caggatgatgaagatcatctcaaagaagatgcgatcaaaaagcaattgcgagtcgttgag
aagcagtttgatattaattatgatgattcccaagttgccgcgattgtccaagccatccag
tcaccggcatttattttgaccggtggcccgggaaccgggaaaaccaccattatcaacggc
attgtcaacacatttgcccgactacatgagtattcactggatattaattcctataaagac
aaaccgtttccaatcgtgttggccgcaccaaccggtcgagccgccaagcacatgactgaa
tctaccgggttgccagccagcaccattcatcgactgcttggtttgaacggccgtgagtcc
aacgacaccactggtacgaaggatattgaaggggcactattaatcattgatgagatgtcg
atggttgatacttacttgttcaggtcgttagttcgggcaattcccaaccatatgcaggtg
gttttggttggtgaccaggatcaattaccatcagtgggaccaggccaggtattccacgat
ttgctggtttctaagcagattccggccatgcagctgaatacaatttaccgccaggagaag
ggctcatcgattatccaattggctcacgatattcatcgggggcagctgtcggaaaatttc
actcagaaccaatccgaccgctcgtttatcccatgtaacgagtaccagatctcttcggtc
attgaacaggtcactaaacgtgccaagcaaaaagacttcggcttgatggacgtccaggtt
ctggcaccgatgtatcgcggtcgagccggaattgacaggctaaatgacgtggttcaagaa
gtctggcagggtgatccaactggtaaaaagtcggttgcgatcagagaacacacttatcga
attggcgacaaagtgctccagctggttaataaccctgaaaataacgtcttcaatggcgac
attgggatcattgtggggatggacgcccctaaaggacagcaagttcccaataagattacg
attgattttgatgagaccgaagtgacttatgagaagaatgagtggacccaattcaccttg
gcttactgcacgtcgattcataaagctcagggtagtgaattcaagatggtgattttacca
atcgttcggcagttctcccggatgcttcagcgcaacttactgtatacggccgtgacccga
gccagcgactttttgattatgctgggtgaaaaagaggcctttgaacaatgtgtccgcaac
gtatcggttaaccggcagaccagtttggtcaaacggctggtagatacaattggcattcag
ccgcaatcaaaaagcgctgacggagagccggaagctgaggatcaaaagcaattgccgact
ggcacgccatcagcccaagagactgatgatgctaaggccgataatctgcccgatcattta
accacagcggttatcaatcaaaatctgattgacccgatgattggcatgggggatgtcact
ccccgcgatttcttgaagtcatag
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