KEGG   Lentilactobacillus buchneri NRRL B-30929: Lbuc_0988
Entry
Lbuc_0988         CDS       T01477                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
lbh  Lentilactobacillus buchneri NRRL B-30929
Brite
KEGG Orthology (KO) [BR:lbh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lbh03016]
    Lbuc_0988
Enzymes [BR:lbh01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     Lbuc_0988
Transfer RNA biogenesis [BR:lbh03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Lbuc_0988
 Prokaryotic type
    Lbuc_0988
SSDB
Motif
Pfam: TruB_N TruB_C_2 SF3b1
Other DBs
NCBI-ProteinID: AEB73247
LinkDB
Position
1043258..1044163
AA seq 301 aa
MDGVIALYKERGMTSHDCISKLRKILHTKKVGHTGTLDPNVDGVLPICIGQATKISELLM
QSGKVYRGAITLGVAYDSEDLDGHLIEQVPVKTPLTDEQINAALAQLTGDILQTPPMYSA
VKVNGHKLYEYARKGITIDRDPRPIHIDYFKQIKPATYDDAAHTQTIYFEVGCSKGTYVR
TLAVDFGKRVGLPSVMSDLTRIKSGGFDISQTSTLAQVKEAVAAEDLSIVLHPLSEALAE
YPGYQLDDSRWSIVSHGGFLDQSISPTHAPVVRLDYQQQVKALYRLDEQIGQYRPFRMFL
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atggatggcgtaattgcactatataaagaacgtggcatgacaagtcacgactgcatcagc
aagttaagaaaaattttgcacaccaaaaaagttggccataccggcaccttggatccaaat
gtcgatggggtgctgccaatttgtatcggccaggcgaccaagatcagtgaactgttaatg
cagtccggaaaagtatatcgcggtgcgattaccctgggagttgcttatgatagtgaggat
ctggacggtcacttgattgaacaggtgccggttaaaacgccgctgacggatgaacagatt
aacgccgctctggctcaattgaccggtgacattctgcagacgccgccgatgtattcggcc
gtcaaagtcaatggccacaagctctatgaatatgcgcgcaaggggatcaccattgaccgg
gatccacgtccgattcatattgattattttaagcaaattaagccggcaacgtatgatgac
gctgcccacacgcagacaatctattttgaagtcggctgttcaaaggggacttacgttaga
acgctggcagtagattttggaaaacgggttggcttgccgtctgtcatgtctgatctgacc
agaattaaaagcggtggttttgatatttcacagacatccactttggctcaagtcaaagaa
gccgttgctgcggaagacctgagtatcgtccttcatccgttatctgaagcactggcggaa
tatcccggttatcaattggacgacagccgctggtcaatcgtttctcatggtggcttcttg
gaccaatcaatcagtcccacccacgcgccggtggttcgattagattatcaacaacaggtg
aaagcgttataccgattggatgaacaaatcggtcaatacagaccgtttagaatgttttta
gcttaa

DBGET integrated database retrieval system