Lentilactobacillus buchneri NRRL B-30929: Lbuc_1010
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Entry
Lbuc_1010 CDS
T01477
Name
(GenBank) endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lbh
Lentilactobacillus buchneri NRRL B-30929
Pathway
lbh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Lbuc_1010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbh03400
]
Lbuc_1010
Enzymes [BR:
lbh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Lbuc_1010
DNA repair and recombination proteins [BR:
lbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Lbuc_1010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
AEB73269
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All DBs
Position
1067806..1068726
Genome browser
AA seq
306 aa
AA seq
DB search
MSETPFLIGSHVSMNGKDMFLGSAKEAASYGETVFMVYTGAPQNTVRKPIEKLNADAGKQ
YMSDHGLQAVVVHAPYIINLGNTFKPENFSFGVDFLRQEIQRAQAIGAKEIVLHPGAHVG
AGPQKAIDQIAKGLNEVIEKDQHVQIALETMAGKGTEVGTSFEQLAEIIDKVSDNDKLSV
TFDTCHTSDAGYDIKNDFDGVLNQFDHIIGLDRLKVIHLNDSKNPQGSHKDRHQILGLGT
IGFDTLNYIAHHAQLKSVPKIMETPILKDPDNKNVKWNPHGYEVAMLKKQQFNPNIIEDM
KAGRPY
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacaccatttttaatcggttctcatgtcagtatgaacggcaaggacatgttc
ctcgggtctgccaaagaggcggcttcctacggtgaaaccgtctttatggtttataccgga
gcgccgcaaaatacggttcgtaaacccattgagaagttgaatgccgatgccggcaagcag
tatatgtccgatcatggcctccaagcggttgtggtccatgcgccttatatcatcaacctg
gggaacactttcaaaccggaaaatttcagttttggtgttgattttttgcggcaggaaatt
caacgtgcacaagccattggggctaaagaaattgtgcttcatcccggcgctcacgttggt
gccggtccgcaaaaagcgatcgatcaaattgccaagggcttaaatgaagtgattgagaag
gaccagcacgtccaaattgctttggaaaccatggctggcaaaggcaccgaagttgggacg
tcatttgagcagttggctgaaattatcgataaggtcagtgacaacgacaaactctccgtg
accttcgacacctgtcataccagcgatgccggttatgatattaaaaatgactttgatggg
gtcttgaatcaatttgaccacatcatcggccttgaccggctcaaagttattcacctgaac
gattccaaaaatccgcagggcagccataaagaccgccatcaaattcttgggttgggaaca
attggttttgataccttgaactacattgcccatcacgcacaattaaaaagcgttcccaaa
attatggaaacgccaattttgaaggatcctgacaataaaaacgttaagtggaatcctcat
ggttatgaagttgcaatgctgaaaaaacagcagtttaatcccaatattattgaagatatg
aaagctggaagaccttactag
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