Lentilactobacillus buchneri NRRL B-30929: Lbuc_1022
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Entry
Lbuc_1022 CDS
T01477
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
lbh
Lentilactobacillus buchneri NRRL B-30929
Pathway
lbh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lbh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Lbuc_1022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbh03021
]
Lbuc_1022
Transcription machinery [BR:
lbh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Lbuc_1022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
HU-HIG
DUF6465
Motif
Other DBs
NCBI-ProteinID:
AEB73281
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Position
1079381..1080625
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AA seq
414 aa
AA seq
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MATKKTDDKVTETKTATAKKATAAKKTTASKTSTKAKSTKAKTTKAKTTKKADKPYKKEF
DAIVKANKPIGHITYDELEKKIEKPYSLSEKDMEGLLESIEDSGISVVDENGDPDPRAIG
AAKKVTKKELSDVSAPTGVKINDPVRMYLKEIGRVSLLSADQEISLAKRIEAGDEEAKQE
LAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYRKGFKFSTYATWWIRQA
ITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPLPEEIGAEMDMPTEKVREIL
KIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPADHAAYELLKEQLESVLDTLTDREENV
LRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKQLKDFLD
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggctactaaaaaaaccgacgataaagtaacagaaacaaagactgccacagctaagaag
gcaactgcagctaagaaaacgactgcatcaaagaccagtaccaaggccaagtcaaccaaa
gcgaagacaactaaggccaagactaccaaaaaagctgacaagccatacaagaaggaattt
gacgccattgttaaggctaataagccaattggccatattacctatgacgaattggaaaag
aagattgaaaagccttattctctgagtgaaaaggatatggaaggcctcttggagagtatc
gaggactccgggatcagtgtcgttgatgaaaacggcgatccggatccgcgagccatcggt
gcggctaagaaagtgaccaagaaggaactttctgatgtttccgcgcccactggtgtgaaa
attaacgatcctgtccgaatgtacctgaaagaaattggtcgagtttcacttctgagtgct
gaccaggaaatttcattggccaagcgaattgaagccggtgacgaagaagccaagcaggaa
cttgccgaagccaacttacggttggtggtttcaattgccaagcggtatgttggtcgaggg
atgcaattccttgatctgattcaggaaggtaatatgggcttgatgaaggccgttgaaaag
tttgattaccgtaaaggattcaagttctcgacttatgcaacttggtggattagacaggct
atcacccgtgcgattgctgatcaggctcggacaattcgaattccagttcatatggttgaa
acgattaacaagttgattcgaattcaacgacaattactgcaggatcttggccgtgagcca
ttacctgaagaaattggtgccgagatggacatgccaactgaaaaggttcgagaaattcta
aagattgctcaagaaccggtttcccttgaaaccccaattggtgaagaggacgacagtcac
cttggtgatttcattgaagatcaggatgcaacttctcctgctgaccatgcggcttatgaa
ttactcaaagaacagctcgagagcgtccttgatacgttaaccgaccgtgaggaaaatgtg
ttacgattgcgatttggtcttgacgacggtcgtacccgcacgcttgaagaagtgggtaaa
gtctttggtgtgactcgcgaacgaattcgtcagattgaagccaaggcattaagaaagctg
cgtcacccatcacgaagcaagcagcttaaagatttcttggattaa
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