Lentilactobacillus buchneri NRRL B-30929: Lbuc_1029
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Entry
Lbuc_1029 CDS
T01477
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lbh
Lentilactobacillus buchneri NRRL B-30929
Pathway
lbh03030
DNA replication
lbh03430
Mismatch repair
lbh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lbuc_1029
03430 Mismatch repair
Lbuc_1029
03440 Homologous recombination
Lbuc_1029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbh03032
]
Lbuc_1029
03400 DNA repair and recombination proteins [BR:
lbh03400
]
Lbuc_1029
Enzymes [BR:
lbh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Lbuc_1029
DNA replication proteins [BR:
lbh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Lbuc_1029
DNA repair and recombination proteins [BR:
lbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Lbuc_1029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AEB73288
LinkDB
All DBs
Position
1087934..1091281
Genome browser
AA seq
1115 aa
AA seq
DB search
MSYVPLQVISSYSLLQSPIRIADLIAEAKDRGYQALALTDLNVMYGAVEFYDACLKAAIK
PLIGLTLQLPGLILTDKEYGWVLIAKNQQGYANLLKLSTLKMTMPELTASQLGDYLSDLV
LILPPAAEMNDLLLQGRADDAADLIDQVKSLGIDPNALKIGVDYHSSDSLNDMLSKLAAD
KQVALVADSPVEYLNATDYFSMQVLKNIGAGEKIANVAQFSKQVGPYWLRPATQIEAQYR
QVHLADALTQVDQIVADCNVEIKKQQPKLPQFDTPNGIDSGTYLRQLCETGLADRLKKNQ
ITDATPYHRRLDQELSVIHSMGFDNYFLIVWDVINFAHQTDIITGPGRGSAAGSLVAYTL
TITDVDPIKYDLLFERFLNPERVQMPDIDLDIPDDKRDEVIQYVHQKYGHKRVAQIITFG
TLAAKQSIRDVGRVFGLNTAQQDQWSKAIPNAFHVTLKDALANSQRLKNLVADSPLNEAL
YQTAQALEGLPRHYSTHAAGLVLSDDPLVNLVPLQNGNEGLLMTQYSKDYVESVGLLKMD
FLGLRNLSILGDALEQVQLTTGKVLDISAVPLDDAKTIQLFADGDTTGIFQFESNGIRNV
LRRLHPERFEDIALVNALYRPGPMQNIDEVVKRKTNHEALTYPDDSLKDILQPTYGVIVY
QEQVMLVASKMAGFSLGQADILRRAMSKKKLGVMEQMKAQFMTGAKQRGYSDSVANKVFD
YIERFANYGFNKSHAVAYSKMAYELAYLKVYYPGEFHVALLNSVNNNSVKVKEYIQAAKS
MGVKVVGPNINHSEARFTFQDQQIVFGLDSIKGVRHDMVVDLLAERQQNGPFKSFPDFLS
RLPGKYRKVELINALIYAGALDVFPFNRSELIAAAPEFISSVELSGNSMSLFKALEPKMP
KMPEMPLMDKLEKENAYLGAYLSGHPTERFAPLAQRLNAETTATLSSGMKNIYLILYITK
VKIIRTKTGKQMAFLDGNDQVGQTSVTVFPNLFTKTQSWLHKDLVILIKGNVEKVNDLQV
VANDIQPAANALMNLKRSKQQSKWYLRIDREHDKNTMFHKLADLSSQYHGQVPVIVFETE
TKKTWQLEDKLWLNPSSETKEQLITIFGRNNVVYK
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
gtgagttatgttccgttgcaagtcataagttcatacagtttactgcagagtccgattcgc
attgcggacttgattgctgaagccaaggatcgcggttatcaggcgttagcgttaactgac
ctcaacgtgatgtatggggccgtggaattctacgacgcttgtttaaaggccgccattaag
ccactgatcggtctgactttgcagctgcccggcttgattttgaccgataaagaatatggg
tgggtgctgattgccaaaaaccagcaaggatatgccaatcttctcaaattatcaacatta
aagatgaccatgcccgaattgacagcttctcagttaggtgactatttgagtgatttagtt
ctgattttgccgccggcagcagaaatgaatgacctgcttctacaagggcgggctgatgac
gctgctgatttgattgatcaggtcaaatccctcgggattgatcctaatgcccttaaaatc
ggtgtcgactaccattcctcggacagcttaaatgacatgttaagtaagctggcggctgac
aagcaagttgctttggtggcggattcgccagttgaatacttaaacgccaccgactatttt
tccatgcaggttctaaaaaatatcggcgcgggagaaaaaatcgccaacgtggcccaattc
agtaagcaagtggggccctactggctgcgtccggcgacacaaattgaggctcaataccgt
caggttcacctcgctgacgcgctgacgcaagtcgaccaaattgtcgctgattgcaatgtc
gagattaagaaacagcagcccaaattgccccaattcgacacaccaaacggtatcgattcc
ggaacttacctgcgccagctttgcgaaacgggactggcggatcgactaaagaaaaatcag
attacagatgcgaccccttatcatcgccggctggatcaagagttatcagtgattcattcg
atgggctttgataattacttcttgattgtttgggatgtgattaatttcgctcaccagact
gacatcattaccggccctgggcgtggatcggccgctgggtcattagtggcgtatacctta
acgattaccgacgtcgatccaattaaatatgatttgctgtttgaacgtttcttgaatcct
gaacgggttcagatgccggatattgatttggatattccagacgacaaacgcgatgaagtc
atccaatatgtccatcaaaaatacggtcacaaacgggttgcccaaatcatcacatttggc
actttggcagcgaagcaatcgatcagagatgtcggccgggtgtttggcttgaatactgcc
cagcaagatcagtggagtaaggccattcccaacgcatttcacgtgaccctcaaagacgct
ttggcgaattcccagcgactgaagaatctggtggctgacagtccgctcaatgaagcactc
taccaaaccgcccaagcgctggaaggcttgccaagacactattcgacccacgctgccgga
ctggtattaagcgacgatcccctggtgaatttagtgccgcttcaaaatggcaacgaaggg
ctgttgatgactcagtattccaaagattatgttgaatcggttgggttgttgaaaatggat
tttctgggactccggaatctgtcaattttgggtgatgccctggagcaggttcaactaacc
accggaaaggttctggacatttctgctgtgcccttggatgacgccaagacgattcaatta
ttcgccgacggggacacgactggcattttccaatttgagtccaacggcattcgaaatgtc
ctgaggcgtctgcatcccgaacggttcgaagacattgccctggtcaacgcgctttatcga
ccgggacccatgcagaacattgatgaggtggttaagcgaaaaaccaatcatgaagcgtta
acctacccggacgactcgctcaaagatattctccagccgacttatggcgtaattgtctat
caggagcaagtgatgctggtcgcttccaaaatggccggtttctctctaggtcaagctgat
attttacggcgggcgatgagtaagaaaaagcttggcgtgatggaacaaatgaaggctcag
ttcatgaccggcgccaaacagcggggatattcagattcagtcgccaataaggtctttgac
tatatcgagcggtttgccaactacggcttcaacaaatcccatgcggttgcctatagcaag
atggcttatgaattagcctacttgaaagtttattacccaggcgaatttcacgttgccctg
ttaaattcggtcaacaataattcggttaaggtcaaggaatacatccaagctgccaaatca
atgggggtcaaggttgttggcccaaatattaatcatagtgaagcccggtttacctttcaa
gatcaacaaattgtgtttggccttgattcaatcaaaggcgtgcgtcacgacatggtagtg
gatttattggctgagcgacaacaaaacgggccatttaagtcgtttccggactttttgagc
cgcctgcccggcaagtaccgcaaagttgaattgatcaatgccttgatttatgccggcgca
ttggatgtttttccatttaaccgttccgaattaatcgctgccgcccctgaatttatcagc
tccgttgaattaagcggcaattcgatgagcttgttcaaagcattggagcccaaaatgcca
aagatgcccgagatgcctctgatggacaagctggaaaaagaaaatgcttatttaggggct
tacttatctggtcatccgacagaacgatttgcccccttggcacagcgattaaatgctgag
acaaccgctacgttgagttcaggtatgaaaaatatttacttgattctctacattaccaag
gttaagattattcggaccaaaaccggcaaacaaatggcctttttagacggtaatgatcag
gtggggcagacttcggtgactgtttttcccaacttatttaccaagacccagtcatggctt
cacaaagatttggtgattttgatcaaaggtaacgtcgagaaagtcaacgatcttcaggtg
gtcgccaatgacatccagccggcggctaacgccctgatgaacctcaagcgatcaaaacag
caatctaaatggtatttgcgaattgatcgcgaacatgacaaaaatacaatgtttcacaaa
ctggccgacctgagcagccaatatcacggccaggtcccggtcatcgtttttgaaacagaa
accaaaaaaacttggcagctcgaggacaagctgtggctaaatccaagttctgaaaccaaa
gagcaattaatcacaatctttggcaggaataatgtggtttataagtaa
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integrated database retrieval system
