Lentilactobacillus buchneri NRRL B-30929: Lbuc_1702
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Entry
Lbuc_1702 CDS
T01477
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lbh
Lentilactobacillus buchneri NRRL B-30929
Pathway
lbh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lbh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Lbuc_1702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbh03021
]
Lbuc_1702
03400 DNA repair and recombination proteins [BR:
lbh03400
]
Lbuc_1702
Enzymes [BR:
lbh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Lbuc_1702
Transcription machinery [BR:
lbh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Lbuc_1702
DNA repair and recombination proteins [BR:
lbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Lbuc_1702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEB73950
LinkDB
All DBs
Position
complement(1761692..1762651)
Genome browser
AA seq
319 aa
AA seq
DB search
MIRMIEFEKPNIHKIEETNNFGEVVVEPLERGYGTTLGNSLRRTLLSSLPGAAVTSIQID
DVLHEFSTIKGVVEDVTQIILNVKKISLKLDGPEDEEENLEIDVIGPADVTAGDIQADSD
VTVLNPDLHIATVAEGATFHMRLTANKGRGYVSAVENKKRSSEMPIGVLPVDSIYTPIER
VNYQVESTRVGQRDDFDKLTLDIWTDGSITPSEAVSLAAKILTEHLEMFVDLTDEAKNTE
IMVEKEETHKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTEKTEADMMKVRNLGRKS
LEEVKEKLAALGLSLRKED
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgataagaatgattgaatttgaaaagcctaacattcataaaattgaagaaacaaataat
tttggtgaagttgtcgttgaaccgctcgagcgtggatatggtacaactctcggaaattct
ttgagacgtacattactgtcatctcttcctggcgctgctgttaccagcatccagattgat
gatgtactgcacgaattttcgacgatcaaaggtgttgtcgaagatgtgactcagattata
ttgaatgttaagaaaatttctttgaaattagatgggccagaagatgaagaagaaaatttg
gaaatcgatgtaattggtcctgctgatgttactgccggtgatattcaagctgacagtgat
gtgactgttctgaaccctgatttgcacatcgctaccgttgctgaaggtgccacattccat
atgcggttaaccgccaacaaaggtcgtggatacgtttctgctgtggaaaacaaaaagcgc
agttctgaaatgcctattggtgtgcttcccgtcgattctatttataccccaatcgaacgt
gtcaactatcaggttgaaagtacacgggttggtcaacgcgatgattttgataagcttaca
ctggatatttggactgatggttcaattactccgagtgaagcagttagtttggcggccaaa
attttaaccgaacatctagagatgtttgttgatttgactgatgaagctaagaataccgaa
atcatggtcgagaaggaagaaacccacaaagaaaaaatgttggaaatgacaattgaagaa
ttggacctatcagttcgttcatacaactgtcttaaacgtgccggcattaatactgttcaa
gaacttacggaaaagaccgaagctgatatgatgaaggttcgtaatcttggtcgcaagtca
cttgaagaagttaaagaaaagcttgctgcattgggcctttcacttcgtaaagaagactaa
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