Lentilactobacillus buchneri NRRL B-30929: Lbuc_1993
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Entry
Lbuc_1993 CDS
T01477
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lbh
Lentilactobacillus buchneri NRRL B-30929
Pathway
lbh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Lbuc_1993
09124 Replication and repair
03420 Nucleotide excision repair
Lbuc_1993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbh03021
]
Lbuc_1993
03036 Chromosome and associated proteins [BR:
lbh03036
]
Lbuc_1993
03400 DNA repair and recombination proteins [BR:
lbh03400
]
Lbuc_1993
Enzymes [BR:
lbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Lbuc_1993
Transcription machinery [BR:
lbh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Lbuc_1993
Chromosome and associated proteins [BR:
lbh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Lbuc_1993
DNA repair and recombination proteins [BR:
lbh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Lbuc_1993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
PDDEXK_1
ResIII
HBB
PhoH
FliJ
Motif
Other DBs
NCBI-ProteinID:
AEB74239
LinkDB
All DBs
Position
2082977..2085337
Genome browser
AA seq
786 aa
AA seq
DB search
MAVHQVGIRELVEFLLRTGDLSPVISSQNTAQEGSRIHRKIQRSRPASYQSEVALKTSIQ
YLDDEYVISGRADGIDDRDGKPLIEEIKTSDLEFSSVPDSTLQLYWGQVKVYAYIVMHQA
DIRSVDLQLTYVQTPDEKITTKTQTITKTDSELFFTALVTEFEQWIKLRHELDENRISSA
KKLQFPFSDYRPGQHKLATNVYKTILLEKHLFVEAPTGTGKTISTLFPAIKSMGEQLINR
IFYFTAKQSTRHVAENTISMMAEQGLKLKSITLTAKDKITFPTEKELPPENNPYMVGYYD
RVRPAIKDIIQHENQITKATIQEYAEKHKVDPFEFSLDVSLFCDVIICDYNYLFDPQVHL
QRFFSFPDPTNCFLVDEVHNLVQRSREMYSATLESSPIDPLLEQLVKKKASNQKVIKRLE
SLKRSFKRYSKPASEVVDKQIAQLAPLDNFNNTLENLIETIHQWLATQAPSDTVDAVVDY
YLQCRRYYLISTFYDETYRTRIIIGDHTIIFRQFCMDPSKQLKACLNLGRAAILFSATLS
PMSYYRQVLGNEEDSLGMISHSSFPPQNCQVIIANNINTLYANRENSLEPICENIYTMIT
QKVGHYMMFFPSMAYLNATLSKFVELHPDIDVINQQPEMDNAARTAFLDAFRTEDHQTKV
GFALLGGIFSEGIDLKNDQLIGVGIISVGLPGMNKESDLIRDYFDSLNGQGFSFAYQLPG
FNNVSQAAGRVIRTDEDKGVIVLMDQRFNQTRYRQIFPQNWTNIKVTNNPNQLRNVLQNF
WQHGNQ
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggccgtacaccaagtcggtattcgagaactagtggaatttttactgcggaccggtgac
ttaagccccgtcatcagcagtcagaatacggcacaagaaggcagtcggatccaccgcaaa
attcaacgcagccgaccagcttcttatcaatcagaggtggcactgaaaacctcgatccag
tatttggatgacgaatacgtcattagcggtcgagcagacggcatcgatgaccgtgacggc
aaaccgttgatcgaagaaattaagacctccgacttggaattcagctcggtgccggactcc
acccttcaactttattggggccaagtcaaagtctatgcttacatcgtcatgcatcaagca
gatattcgatcagttgatctacagttgacctacgttcagacacctgatgaaaaaatcacc
accaagacccagacgattaccaaaaccgactcggaactcttcttcaccgccttggtcacc
gaatttgagcaatggatcaaactccggcatgaactggacgaaaaccgaatcagttcagcg
aaaaaactccaatttccattttccgactaccgccccggccagcacaagttagcaaccaat
gtctacaagaccattcttttggaaaagcacttgtttgttgaagcgccaactggaaccggc
aagacgatttctaccctttttccggcaattaaatcaatgggtgaacagctgatcaaccgc
attttttattttacggccaagcagagtacccgtcacgtggcggaaaacaccatttcgatg
atggctgaacaagggctgaaattaaaaagcatcaccctcaccgccaaggacaagattacg
ttcccaactgaaaaagaactgccacctgagaacaacccctacatggtcggctactatgac
cgcgtccggccggcaattaaagatattattcaacacgagaatcaaatcaccaaagccacc
attcaagaatacgcagagaagcacaaagttgaccccttcgaattttcactcgacgtcagc
ctgttttgtgatgtcatcatttgcgactataactacttgtttgatccccaggttcacctg
cagcgtttcttctcatttcccgatcccaccaactgctttttggtcgatgaagtccataat
ctggtgcagcgatcacgggaaatgtattcggcgacgttggaatcatcaccgattgatccc
ctcttagaacagttggtgaagaaaaaggcaagcaaccaaaaagtcattaaacggcttgaa
tccttgaagcgctcatttaaacgttatagcaaaccagcctcagaagtggttgataagcag
attgctcaactggctccactggataatttcaataacactttggagaatctaatcgaaacg
attcaccagtggctggcaacccaagccccgagtgataccgttgacgcggtagtcgactat
tatctgcaatgccgccgctattacctgatcagcaccttttatgacgaaacctaccgcaca
cggatcatcattggcgatcacaccatcatttttcgccagttctgcatggatcccagcaag
cagctcaaagcctgcttgaaccttggccgggctgcaatcctattttcggccactttgagc
ccgatgtcatattaccgacaagtcttgggtaacgaggaagacagtttgggaatgatttca
cactcgtcatttccaccccaaaattgccaggtgattatcgccaacaacatcaatacacta
tacgccaaccgggaaaatagtctggagccgatctgcgagaacatttacaccatgatcact
caaaaggttggccattacatgatgttcttcccttcaatggcgtacctgaacgccacattg
agtaaatttgtcgagctgcatccagatattgacgttatcaaccagcagccggaaatggac
aatgcggcccggaccgcctttttggatgcctttcgcacggaagatcatcaaaccaaagtt
ggttttgctttactgggtggcattttttcggaaggcatcgatctgaaaaatgatcagctg
attggcgtcggcattatcagtgtcggtcttcccggcatgaacaaagaatccgacctcatc
agagactactttgactcattgaatggtcaaggattctcatttgcctatcagctgccaggc
tttaataacgtcagccaggccgccggacgggtaattcgcactgacgaagacaaaggtgtg
atcgttttgatggatcaacgcttcaaccaaacccgttaccggcaaattttcccccagaat
tggaccaacattaaggtcaccaataatcccaatcagctaagaaatgtcctgcaaaacttt
tggcagcacggtaatcagtaa
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integrated database retrieval system
