Leptospira biflexa serovar Patoc Patoc 1 (Paris): LEPBI_I1309
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Entry
LEPBI_I1309 CDS
T00693
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lbi
Leptospira biflexa serovar Patoc Patoc 1 (Paris)
Pathway
lbi03410
Base excision repair
lbi03430
Mismatch repair
lbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LEPBI_I1309 (recJ)
03430 Mismatch repair
LEPBI_I1309 (recJ)
03440 Homologous recombination
LEPBI_I1309 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbi03400
]
LEPBI_I1309 (recJ)
DNA repair and recombination proteins [BR:
lbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LEPBI_I1309 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LEPBI_I1309 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LEPBI_I1309 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ABZ97419
UniProt:
B0SP95
LinkDB
All DBs
Position
I:complement(1363581..1365569)
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AA seq
662 aa
AA seq
DB search
MLSEVRTKVESKRPLLRYLVDRREGLKNTSPKELLFSDFSCLHSPFSLPDIEDAVSLLLS
FAKSNKKILLYGDRDSDGVSSTCLLAFFLKSHPEFLTANLEVMVSSESDPYGLCKEAVSK
IQKAKPDLLVTLDFGSSQADEIDSLTALGIQVIVLDHHEVPVRIPKNCALVNPRRTDSEY
PEKKICTAALSFKLVSAILFRTSKEWNQLYTKTVTNEDGTKEVLYFRNGIKLSKDQLDLI
QNPRENPSKMENQIPIGDKNSESAPIDLSSALPFPEEFSTNIPLDDERKLFFYQCQKIPE
FFEQLEEETDLAGIGTITDMMPLVGENRHFVKLALTSLTKLYVGDKKRKGLKELLKELKL
NPLGITTKDLGWSIGPVINAAGRMGKTEEAVNLLLSENELEAKTRAKLLLSINEERKERT
KRNMDRVERYFARKPERTTHDAIYCYEPDMEPGVSGIVATRMVDTYKKPAIFIAPDNGDA
RGSVRSYGQENVLTLLESLSEHFLHFGGHPEAGGFSISIDQIPKLEAALYEKAKLWLAED
EERPKEHLINTDFTVLPEEMGEKLLKEWKDLEPFGQGNPDIKLGIRNAKAIHLTPLSGGK
HVRFHIIGSGSLKYMIWNKGEEFQSFMSNHGSFDLVGSLEENFYQGRSTLQFIVEWFGKA
ES
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
ttgttgtctgaagttcgaaccaaagttgaatccaaaaggcctttacttcgatacttagtg
gatcgaagagaaggtctaaaaaacacttccccgaaagaactcctattctctgatttttct
tgtcttcattcccccttctcccttccggacatcgaagacgcggtatctctcctcctttcc
tttgccaaatctaataaaaaaatcttattatatggagaccgcgactccgatggagtgagt
tctacctgtttacttgctttctttttgaaatctcatcctgaatttttgacagccaacttg
gaagtaatggtctcttcagaaagtgatccgtatggtctttgtaaagaagctgtgagtaaa
atccaaaaagccaaaccagacttacttgtcactttagactttggttcaagccaagcggat
gaaatcgattccttaactgcattgggaatccaagtgattgtccttgaccatcatgaagtt
cccgttcgtatccctaaaaactgcgccttagtgaacccaagacgaacggattccgaatac
ccagaaaaaaaaatctgcactgctgccttatccttcaaacttgtctctgccattttattt
cggactagtaaagaatggaaccagttgtatacaaaaacagtaacaaatgaagatgggacg
aaagaagttttgtatttccgaaatggaatcaaactttccaaagaccagttagatttgatt
caaaatccaagggaaaacccatccaaaatggagaatcaaattcccatcggagacaaaaat
tcagaatcggcccccatcgatctatcgagtgcacttcccttcccagaagagttttccacc
aatatcccgttagatgatgaacgaaaactgtttttttaccaatgccaaaaaatcccggaa
ttttttgaacaattggaagaagaaacggatcttgctgggatcggtaccatcactgatatg
atgcctcttgtcggagaaaaccgccattttgtcaaactggcactcacttctctcaccaaa
ctttatgtaggtgacaaaaaaaggaaaggtctcaaagaactattaaaagaactgaaactc
aatccccttgggatcaccacaaaagacttgggttggtccattggacctgtgatcaatgct
gcaggtcgaatgggaaaaacagaagaagcagtaaacctacttctctccgaaaatgaattg
gaagcgaaaacaagggcaaaactccttctttccatcaatgaagaacgaaaagaaagaaca
aaacgaaacatggaccgtgtagaacgatactttgcacggaaaccggaacgaaccacgcat
gatgcgatttattgttacgaacctgatatggaacctggagtgagtgggatcgttgccaca
aggatggtagatacctacaaaaaacctgccatctttattgcacctgacaacggtgatgcg
agaggaagtgtccgttcgtatggacaagaaaatgtcctcaccttactcgaatccttatct
gaacattttttacattttggtggccatcccgaagcaggtggtttttctatttccatcgat
caaattccgaaattggaagccgccctctacgaaaaagcaaaactttggttagcggaagat
gaagaaagaccgaaagaacatttgatcaataccgattttaccgttttacctgaagaaatg
ggtgaaaaactcttaaaggaatggaaagacttagaaccctttggccaaggaaatcctgat
atcaaacttgggatcaggaatgccaaagctatccacctaacgcctctcagcggtggaaaa
catgttcgtttccatatcattgggagtggttctttaaaatatatgatttggaacaaaggg
gaagaattccaaagctttatgtccaatcatggtagctttgatttggtagggagtttagaa
gaaaacttttaccaaggaaggagcacactacaattcattgtggaatggtttggaaaagca
gaatcctaa
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