Leptospira biflexa serovar Patoc Patoc 1 (Paris): LEPBI_I2827
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Entry
LEPBI_I2827 CDS
T00693
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lbi
Leptospira biflexa serovar Patoc Patoc 1 (Paris)
Pathway
lbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LEPBI_I2827 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbi03019
]
LEPBI_I2827 (rhlE)
Enzymes [BR:
lbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LEPBI_I2827 (rhlE)
Messenger RNA biogenesis [BR:
lbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LEPBI_I2827 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Utp25_C
P-loop_SecA
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
ABZ98901
UniProt:
B0SND4
LinkDB
All DBs
Position
I:complement(2919379..2920794)
Genome browser
AA seq
471 aa
AA seq
DB search
MQKQIETFSDLKLDRYIQKAVAETGYTKPTPIQIQAIPLLLDNHDLLGCAQTGTGKTAAF
ALPMIHNLISTRAKPNPKQPRSLVLVPTRELAIQVHESFVLYGKYTQIRTAVIFGGVGQN
PQAKAIASGLDVLIATPGRLVDLMNQNLVSLKNLEIFVLDEADRMLDMGFIHDIRKIISY
LPKRRQNLFFSATMPPEIEKLANSILVEPIRIDVTPVSSTVELISQSVMYTELADKKNLL
LHLFKDKNFKKTIIFTKTKHGANKISELLNKSGIKTDVIHGNKSQSARQRALEDFRSGKN
RALVATDLAARGIDIDDITHVINYEIPYVPETYVHRIGRTARAGKNGIAIAIAEADERSL
IKDIEKVIGISIPVDRDHPYHAARVESHTGKAPKLHGSGGGGNRGQRRPTQSGDSSSGRN
RNSQQNSKQNSNRSQGQSEKRKPSDSGYKSEPKKSSPSAKKSPRAKKSRYR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaacaaattgaaacattttcagatctgaaactagatcgatacatccaaaaagca
gtcgctgagactggttatacaaaaccgacacccatccaaatccaagccattcctttactt
ctcgacaatcacgatctgttaggttgtgctcaaacaggaaccggtaaaaccgctgctttt
gctttgccgatgatccataatttaatttccacgagggcaaaaccgaatccaaaacaacca
cgatctcttgtgttagttcccactcgtgagcttgccattcaggtccatgaaagttttgtt
ttatatggaaaatatacccaaattcgaacggcagtcatttttggtggtgtgggacaaaat
ccccaagccaaggccattgcaagcggattggatgtgctcattgccacacctggtcgcctg
gttgatttgatgaaccaaaatttggtatcattgaaaaatctcgaaatatttgtgttagat
gaagcagatagaatgttggatatgggttttatccatgacattcgaaaaatcatttcgtac
ttgccgaagcgcagacagaatttgtttttttctgcaacgatgccacctgaaatagaaaaa
ttggcaaactcaattttggtagaaccaattcgtatcgatgtaacacctgtttcgtcgaca
gtcgaactcatttcacaatctgtgatgtatacagaactagcagataaaaaaaatcttctc
cttcatttgtttaaagataaaaattttaaaaaaacaattatctttaccaaaacaaaacat
ggagccaataaaatttcggaactcttaaacaaaagtggaatcaaaacggatgtcattcac
ggcaacaaaagtcaatctgctagacaaagagccttagaagattttcgttcaggaaaaaac
agagctcttgtggcaactgatttggctgccagaggaatcgacatcgatgacatcacacat
gtcattaattatgaaattccttatgttcctgaaacctatgtacaccgaattggacgtaca
gcacgtgcagggaaaaatggaatcgccattgccatcgcagaggcagacgaaagatcactg
atcaaagacattgaaaaagtgattggaatctcgatcccagtggatcgggaccatccttac
catgcagcgcgggtggaatcgcatacaggcaaggctcccaaactccatggatctggaggt
ggcggcaatcgaggccaaagacgccctacgcaatcgggagatagttcttctggcagaaac
agaaactcacagcagaactccaaacaaaactcaaataggagtcaagggcaatcggaaaaa
agaaaaccaagtgattcaggctataagtctgagcctaaaaaatcatctcctagtgcaaaa
aaatcaccgagagccaaaaagtcacgatataggtag
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