Leptospira biflexa serovar Patoc Patoc 1 (Paris): LEPBI_p0020
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Entry
LEPBI_p0020 CDS
T00693
Symbol
recB
Name
(GenBank) Exodeoxyribonuclease V beta chain, UvrD subfamily
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
lbi
Leptospira biflexa serovar Patoc Patoc 1 (Paris)
Pathway
lbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LEPBI_p0020 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbi03400
]
LEPBI_p0020 (recB)
Enzymes [BR:
lbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LEPBI_p0020 (recB)
DNA repair and recombination proteins [BR:
lbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LEPBI_p0020 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ABZ99834
UniProt:
B0SUF0
LinkDB
All DBs
Position
p74:complement(18773..22402)
Genome browser
AA seq
1209 aa
AA seq
DB search
MKMDHPLVNHPNFIEASAGTGKTHLIMQMLGDVMTHDVTNHTKENRLLQFLVLTFTEKAA
GELKARLKLKILELYENGKHPEYYHYLRDLDQVTISTIHGFCNMVLTEYPVETQNNPNVK
LTSNEELIRKTFYDLKRSQWEGRDKESLANDILISNLKKKEDLVISSTSKLLADTKDYVF
PEFVSLEECIHNANKSNLLGELITICEAFKGPTGEAIAAQGAKGSIPKWMENWSSLESFA
KAIRNEDTKYIAKELKRISKLSRSLGKEGKASGFDYFLLEGSTTIAKNLDAASVVLQGKI
KSVVLSLKEIFPLGQLDYDGSIFLQNTVHELTSKTKSIIENGEYLTYDQMILKVYDVIVR
NPNQILIQSLRERFQVCILDEFQDTDKNQYQIFKTLFLDKDTKSRMLFCIGDPKQSIYGF
RGADIGIYLEASRDFEGSKSTLETNYRSTKELIHGLNTIFHDETKEWGETHFFPIEEPGS
SKENYLYKKVSSPDIDTIKYKYVNPEESAIHIFDFEERFPNVNKSRNIWAETIRNEIKRI
QNKETSLLYNKKGEREIQEIKLKDIAILCGNKKETELVEFYLTKAGIPCSIYKQRGIYQS
READQIENLLECLQSSNSSQSYKKILFSDIFCIHPHEIQKFDEHSIDSYEKSLIDKWQRL
IKENRYASFFRSVMDETKLFWLEGNHTLEWERKRTNFRQIFQKLLEVQLKSNCGLLELLA
SLRELKQKKQSPEEEPLFDRETEEDSVQILTIHASKGLEWPVVFLFYFGNRGTNLTNTEY
PIEIETPEGKKRKWILDLWDLNPEKEDEENHFLNEQKRLLYVALTRPNLRLYLPKLNWGR
SKKEDSLPNSGYSQILYQELIRIQTLQNQNPFLESSFVFRNPNEFSESQTINLQTSSVTQ
TKKPSFPILYPSEIKIGRVLLQHSYTSLQANEKNLNVSQEEKKKELEETPDVEVSTTFEL
PSSAKVGNFLHKILELCDFSTFQLEVDAILESPSWKWAYQKSFLRYPLEIEGKDAKIEHT
VATLLKHAMTAKIKLATGNSFSLSELKEEEKSAELKFHLFLQNLLKESGASLTDGFEHYL
KGAIDLVFVKDQKFYIVDYKSNLLPNNDYSSEAVANAVRDKGYLFQKSVYSFILFEYLKS
LFGPDIALEKFGGVYYLFLRGMLGDNQTGIYSDLKHSDSVWTIEQFEGIKKEVMAYIRSA
SDQLEKVYS
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatggaccatcctttagtcaaccatcccaattttatcgaagcttccgctggaacc
gggaaaacacatctaatcatgcaaatgttaggtgatgtgatgacccatgatgtaacaaat
cataccaaagagaatcgactgcttcaatttttagtgcttacctttacagaaaaagccgca
ggcgaattaaaagcccggttaaaattaaaaatcttagaattatatgagaacggaaaacac
cccgaatactaccattacctccgcgatttagaccaagtcaccatctcgaccatccacggt
ttttgtaatatggtgttaacggaatacccagtcgaaacccaaaacaatcccaatgtaaaa
ttaacatcgaatgaagaattgattcgaaagaccttttatgatctgaaaagaagccaatgg
gaagggagagacaaggaatcacttgcaaacgatattcttatctccaatttaaagaaaaag
gaagacctcgttataagttccacttcgaaactccttgctgatacaaaggactatgtattt
ccggagtttgtatccttagaggaatgcattcacaacgcaaacaaaagtaatctcttagga
gaactcataaccatctgcgaagctttcaaaggaccaaccggtgaagcgattgccgctcaa
ggagctaaaggtagtatcccgaaatggatggaaaattggtcatcactcgagtcatttgca
aaagcgatccgaaacgaagatacaaaatatatagcaaaagaattgaaacgaatttcgaaa
ttaagccgttcccttggaaaagaaggcaaagccagtggattcgattatttccttttggaa
gggagtactaccattgcaaaaaatttagatgcagcatccgttgtgttacaaggaaaaata
aaatctgttgttttatcgctaaaagaaatcttccctcttggccaattggattatgatgga
tccatctttttgcaaaatacagtgcacgaactcacttcgaaaacaaaatccatcatcgaa
aatggcgaatacctgacttatgatcaaatgatcttaaaggtatatgatgtcattgttcgt
aatcccaaccaaatattaattcaatcgttacgagaacgattccaagtttgtatcctggat
gaattccaagacacggacaaaaaccaataccaaatctttaaaactttatttttagacaaa
gatacaaagtccagaatgctcttttgtattggagatccaaaacaaagtatctatggattt
cgcggagctgatattggaatttatctggaagcatctcgtgacttcgaaggatcaaaatcc
accttagaaaccaactataggtccacaaaagaattaatccatggactcaataccattttc
cacgatgaaacaaaagaatggggtgaaactcatttttttcccatcgaagaaccaggctct
agtaaagaaaactatttatataagaaagtatcatcacctgacatcgataccatcaagtac
aagtatgtgaatcctgaggaatcagcgattcatatttttgatttcgaagaacggtttccg
aatgtaaacaaatccagaaatatttgggctgaaacaattcgaaatgaaatcaaacgaatc
caaaacaaggaaacaagtcttctatacaataaaaaaggcgaacgcgaaatccaagagatc
aagttaaaggacattgccatcctttgtgggaataaaaaagaaacagaacttgttgaattt
tatctaacaaaagcgggaatcccctgttccatttacaaacaaagagggatttaccaatcc
agagaagcagatcaaattgaaaatctattggaatgtttacaaagttccaactcctcacaa
agttataaaaaaatcctattctctgatatattctgcatccaccctcatgaaatccaaaag
tttgatgaacactccattgactcctatgaaaaatctctcatcgacaaatggcagagactt
atcaaagaaaatcgatacgcaagtttctttcgttctgtgatggacgaaaccaaactcttt
tggttggaagggaatcatacactggaatgggaacgaaaacgtacaaacttccgacaaatc
tttcaaaaattattagaagtacaactgaaatcaaattgtggcttgttagagttactcgcg
agtttgcgtgagctcaaacaaaaaaaacaatctcccgaagaagagccgttatttgatcgt
gaaacagaagaagattcggtgcaaattttaaccatccatgcatcgaaaggattggaatgg
cctgtcgtattcttattttattttggcaatcgagggaccaatctcaccaatacagaatac
ccaattgaaatagaaacgccagaaggtaaaaaaagaaaatggattcttgacttatgggat
ttgaatccagaaaaagaagacgaagaaaaccatttcctgaatgaacaaaaacgtctgtta
tatgttgccctgacaaggcccaatcttaggttataccttcccaaactcaattgggggagg
tccaaaaaagaagattcgcttccgaattctggttatagccaaatcctctaccaagaatta
attcgaattcaaacccttcaaaatcaaaatccttttcttgagtcgtcttttgtattccga
aatcccaatgaattttcagaatcacaaacaataaaccttcaaacatcaagtgtcacccaa
acgaaaaaaccatctttcccgattctctacccttccgaaatcaaaattggtcgagtgctc
ttgcaacatagttatacaagtttgcaagccaatgaaaaaaacttaaatgtttcccaagag
gaaaagaaaaaagaattagaagaaactcctgatgtagaagtaagcacaacgttcgaattg
ccctcgagtgcgaaggtcggaaactttttacataaaattcttgaattatgtgatttttct
accttccaattggaagtggatgccatcctcgagagtccttcctggaagtgggcgtaccaa
aaatctttcttacgatatccattggaaatcgaaggtaaggatgcaaaaatagagcataca
gtggctactttattgaaacatgcaatgacagcaaagatcaagcttgcgacaggcaactcc
ttctctctcagtgaattaaaggaagaagaaaaatccgcagaattgaaattccatttgttc
ttacagaacttactgaaagaaagtggtgcctccttaacagatgggttcgaacactactta
aaaggcgccatcgatttggtttttgtaaaagatcaaaaattctatattgtcgattataaa
tccaatttgttaccaaacaacgattatagtagtgaagcagtcgcaaatgcagtccgagac
aaaggttatctcttccaaaagtctgtgtattcgtttattttatttgaatacctaaagtct
ctttttggacccgatatagccttagagaagtttggtggagtgtattatttattcttaaga
ggaatgttaggtgacaaccaaacaggcatctactctgatttaaaacattctgattccgta
tggacgatcgaacagtttgaaggaatcaaaaaagaagtgatggcctatatccggagtgcc
tctgaccaattggaaaaggtatattcatga
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