Leptospira borgpetersenii JB197: LBJ_0193
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Entry
LBJ_0193 CDS
T00404
Symbol
rnd
Name
(GenBank) Ribonuclease III
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lbj
Leptospira borgpetersenii JB197
Brite
KEGG Orthology (KO) [BR:
lbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbj03016
]
LBJ_0193 (rnd)
Enzymes [BR:
lbj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LBJ_0193 (rnd)
Transfer RNA biogenesis [BR:
lbj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LBJ_0193 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ABJ74934
UniProt:
Q04VY6
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All DBs
Position
1:complement(227346..228512)
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AA seq
388 aa
AA seq
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MQINSDYIVVDTIRSLQLVLITLSQADSISIDTESSGYYTYFSKVCLIQISAKGKNYIID
PLKLQNLDGLGNLFEDKKILKIFHSAIDDIKALKKDFGFKFHNIADTGFSSRLLDHEQYS
LTYLVDYYHKIKLSKKEQKSNWEKRPLEKSQLQYAALDTVYLETIWEKMKEELTKRNLYE
EAFSEFEKIASEEPGAEGNSISMDKFPEILEYSADERRFIYDTLVFRDDKSRKLNKAPFR
VFNNEKVILLVKSRRDMAKLTEIVGKKDAESLFRIYANPSGPPIQKSELFKKPGENLTNE
EGERFKRLRIWRETIMSIRRMSHQMMPSNKMIAELAQRNPKTLDELREMNLFSEWKVIHY
GPSILAALENVPYESNIKGLIPINKKFE
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcaaataaattccgattacatagtcgtagatacaattcgaagcctacaactcgttctc
atcactctgagtcaggccgattccatctccatcgatacggagtcctccggttattatacc
tatttctcaaaggtctgcctgatccaaatttcggctaagggaaaaaattatatcatcgat
cctttgaaattacaaaatttagatggccttggaaatttatttgaagataaaaaaatccta
aagatattccattccgccattgatgatattaaagcccttaaaaaagacttcggttttaaa
tttcataacatcgcggataccggattcagttcccgtcttttagatcacgaacaatattct
ttaacttatcttgtggattattatcataagataaaactttccaaaaaagaacaaaaatct
aattgggaaaaacgacctcttgaaaaaagtcaacttcaatacgcggctttagatacggtt
tatctagaaacgatttgggaaaaaatgaaggaagaacttaccaagagaaatctttacgaa
gaagcgttttccgaatttgaaaagatcgcatccgaagaaccgggcgccgaaggaaattcc
atctccatggataagttccccgagattttggaatacagcgccgatgaaagaagatttata
tacgacacgttggtttttagggacgataaatctagaaagttaaacaaagctccttttcgg
gtattcaacaacgaaaaggtaattcttctcgtaaagtcaagaagagacatggcaaagtta
accgaaattgttggtaaaaaagacgcggaaagtttatttcggatttatgcgaatccaagc
ggacctccgattcaaaaatccgagctttttaaaaaaccgggtgaaaacttgacgaacgaa
gaaggcgaacgtttcaaacgtctgagaatttggagagaaacgatcatgtccatcagaaga
atgagtcatcagatgatgccttcgaacaaaatgatcgcggagttggcccaaagaaatccg
aaaactttagacgagttgagagagatgaatcttttctcagagtggaaagtgattcactac
ggcccctctattttggccgcattagaaaatgtaccttacgaatcgaatatcaagggactc
attccgataaataaaaaattcgaatag
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