Leptospira borgpetersenii JB197: LBJ_0683
Help
Entry
LBJ_0683 CDS
T00404
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lbj
Leptospira borgpetersenii JB197
Pathway
lbj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LBJ_0683 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbj03400
]
LBJ_0683 (recD)
Enzymes [BR:
lbj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LBJ_0683 (recD)
DNA repair and recombination proteins [BR:
lbj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LBJ_0683 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
AAA_22
Viral_helicase1
UvrD-helicase
SH3_13
Helicase_RecD
UvrD_C
DEAD
PIF1
AAA_16
NPHP3_N
SLFN-g3_helicase
T2SSE
AAA_28
AAA_12
ResIII
ARM_LIN
nSTAND3
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ABJ75358
UniProt:
Q04UR2
LinkDB
All DBs
Position
1:complement(818242..820089)
Genome browser
AA seq
615 aa
AA seq
DB search
MEESFSHFIEKLKADILDLYESGALKKIPENFSDYLLEILNSIWSSMEEGSLCVPVKKEW
RDVLKLKPPGLVVDKFENQEWVYFEKTHRSKTDLESLLKERIQNDVPPKVDRHRAEKILK
NLESKSFPLKEAQVKTILSCLNSSFHIVSGGPGTGKTTVVAFLLEILNQLGQLPSPEEIA
LVAPTGRAAQRLTESIQENLKKISEMKGSDFLRGQTVHGLLSYKSSLGGFYYNRERYLPH
RLIIVDEVSMVDLNLMLSLWNAIPRDTKKDDRKIPLRFILIGDPHQLPSVEKGAVLSDFL
SVLESKKANFASRLEGSNRQKSKGNVSKIVVLAEEILGYSPENLNLGTKIDDSFPKTTTI
GENSKYESEVVWLQNPANKTSDHLSRDEVVEKLWTEIFHPGISKIGTWKVKDSFDLNEAG
FILKFQEELKKFRCLTVFRNGYWGVEAIQTKIMNLAAQDLFHRKDQKPDFFAKRLSKRLY
FIGLPILITQNDKNRKLFNGDIGIVLRMESTGELRAVFPIEGKLLPFALDTLPKHEPAFV
MSIHKSQGSEYDTILIYIPDHPESQEKERSHRLLNRQILYTGITRAKNQVILAGNPKTWE
IGIANSQKRNTGFKI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtcgttctcccattttattgaaaaactcaaagcggacattttagacttgtac
gaatccggggccctgaaaaaaattcccgaaaatttttcggattatttattagaaattctg
aattcgatttggagttccatggaagagggaagtttatgcgtccccgtaaaaaaggaatgg
agggacgttttaaaattaaaacctcccggtttagtcgtggacaaattcgaaaaccaggaa
tgggtttacttcgaaaaaacgcatcgatccaaaaccgatctggaaagtctcctaaaggaa
aggattcaaaacgacgttccgccgaaagtcgaccgacaccgtgccgagaaaattctcaaa
aatctggaatcaaaaagttttccattaaaagaagcgcaggtaaagacgattctctcctgt
ctcaattcctcctttcacatcgtcagcggaggcccgggaaccggaaaaacgacggtcgtc
gcatttctattagaaattttgaatcaactgggacaacttccttctcccgaagaaatcgcg
ctcgtggcgcctacgggaagagctgcacaaagattaacggaatcgattcaggaaaaccta
aaaaaaatctccgaaatgaaaggatccgatttcttacggggacaaactgttcacggactt
ctctcctacaaatcgtcgttaggcggattttattacaaccgggaaagataccttccgcat
cgattgatcatcgtggacgaagtttcgatggtcgatttaaatctgatgctttccttatgg
aacgcaatccctcgcgataccaaaaaagacgaccgaaaaattccgctccgattcatactg
atcggagatccgcatcaacttccttccgtggaaaagggcgcggtattaagcgacttttta
tccgtactagaatcgaaaaaagcgaattttgcctccagactcgagggaagcaatcgtcaa
aaatcgaaggggaacgtttcaaaaatcgtcgttcttgcggaagaaatcctcggatattcc
cccgaaaacctaaatctcggaacaaagatagacgattcttttccgaaaacgacgacgatc
ggagagaattcgaaatatgaaagcgaagttgtatggttgcaaaatcccgcaaataaaact
tcggatcacttatcgagagacgaagtcgttgaaaaactttggaccgaaatttttcatccc
gggatttccaaaattgggacttggaaagtcaaggattctttcgacttaaacgaggccggc
tttattttaaaatttcaggaggagttgaaaaaattccgctgtcttaccgtttttagaaac
ggttattggggagtggaagcgattcaaacgaaaattatgaatctggccgcgcaggatctt
tttcatagaaaagaccaaaaaccggattttttcgcaaaacgcctttccaaacgtctttac
tttatagggcttcccatcttaatcacgcaaaacgataaaaacagaaaacttttcaacggc
gatatcggtatcgttttaagaatggaatcgaccggagaactcagagcggtttttccgatc
gaaggtaaattattgcctttcgcgttagacactcttccgaaacacgaacccgcattcgtg
atgagcattcacaaaagtcagggatcagaatatgatacaattctaatctatattccggat
catccggaatctcaggaaaaggaacgatctcatagacttctcaaccgtcagattttatac
actggaatcacaagagccaaaaaccaagtaattcttgcgggcaacccgaagacctgggaa
atcggaatcgccaattctcagaagagaaacaccggttttaaaatttaa
DBGET
integrated database retrieval system
