Leptospira borgpetersenii JB197: LBJ_0686
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Entry
LBJ_0686 CDS
T00404
Symbol
recQ-2
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lbj
Leptospira borgpetersenii JB197
Pathway
lbj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LBJ_0686 (recQ-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbj03019
]
LBJ_0686 (recQ-2)
03400 DNA repair and recombination proteins [BR:
lbj03400
]
LBJ_0686 (recQ-2)
Enzymes [BR:
lbj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LBJ_0686 (recQ-2)
Messenger RNA biogenesis [BR:
lbj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LBJ_0686 (recQ-2)
DNA repair and recombination proteins [BR:
lbj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LBJ_0686 (recQ-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_C_2
Ig_CFAP65_8th
Motif
Other DBs
NCBI-ProteinID:
ABJ75361
UniProt:
Q04UQ9
LinkDB
All DBs
Position
1:826750..828198
Genome browser
AA seq
482 aa
AA seq
DB search
MPSLSQLGNIFGISTFRSSQERIILDVLSGKNCLVVMPTGMGKSICYQLPSLALDGLTVV
ISPLIALMQDQVLKLKRLGIDAGYINSSLSKQEKLRCYRDLKEGKYKIVYVSPERFRKKE
FIDSLQLRKVSLLAIDEAHCISQWGHDFRPDYMKIGEFREILGKPTIIALTATATLEIQK
DIVLQMNLRESEIQVYNEGICRPNLFLDVRTFVDEPSKSDAILELLKKQKKSTIVYFNLI
RSLEKFGEKLDLQKVPYKIYHGRLSPEQRKKVQRQFLESEDTILLATNAFGMGVDKPNIR
MIIHAELPSSLEGYYQEIGRAGRDGDPSDCHVFYDQDDLTVLMDFIEWQNPDASFIARTY
QTMERLGEKLSSIEYDELQSMIVHKNRRDHRLQTVLNLFERHGVTSGELEKKSLKLRSPL
PDVLCSSEYLERKKKTSLKRLYQMFLYLKSERCRREFVYEYFDAKWSGCGNCDVCKYRTT
RV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcttagtcagctcggaaacattttcggaatttccacattcagaagttctcaa
gagagaatcattttggacgttctttccggaaagaattgtctggtcgtcatgccgactgga
atgggaaagtcgatttgttatcaacttccttctcttgctttggatgggttgaccgttgtc
atatctcctttaatcgcgttgatgcaggatcaggttttaaaattgaagcgacttgggatc
gacgcgggttatattaattcctctctttccaaacaggaaaagcttcggtgttatcgggat
ttgaaagaaggaaagtacaaaatcgtgtatgtttcaccggaacgatttcgtaagaaagaa
tttatagattcgcttcaacttagaaaggtatctctacttgcgatcgacgaagctcattgt
atcagtcagtgggggcacgattttagaccggactatatgaagattggggaatttcgggag
attctaggaaaaccgactataatagcgttaaccgcaactgcaactcttgagattcaaaaa
gacattgtgcttcaaatgaatttacgggaatcggaaattcaagtttataacgaaggaatc
tgcagacccaatctgtttctggacgttcgaacttttgtagatgaaccttccaagtcggat
gcgattcttgaacttttgaaaaaacaaaaaaagagtacaatcgtttattttaatttgatt
cggagtttggaaaagtttggagagaaattggatctacaaaaagttccgtataaaatctat
cacggacgtttgtcccccgagcaaagaaaaaaagttcaaagacaatttttagagtcggaa
gatacgattttactagcgacaaatgcattcgggatgggagtcgataaaccgaatatacga
atgatcatacacgcggaacttccttcgtctttggaggggtattaccaggaaatcggaaga
gcggggagggacggggatccctccgattgtcacgtattttacgaccaagacgatttgacc
gtcttgatggattttatcgagtggcaaaatccggatgcatcttttattgctcgtacctac
caaactatggaacgacttggagaaaaattgtcttcgatcgaatacgacgaattgcagtct
atgatcgttcataaaaatcgaagagatcatcggcttcaaaccgttctcaatttgtttgaa
aggcacggagttacatcgggagagttggaaaaaaagtcgctgaaattgagatccccgttg
ccggatgtgctttgctcttccgaatatttggaacgaaaaaagaaaacgagtttgaaacga
ttgtatcaaatgtttctttatctgaaatcggaaagatgcagaagggagttcgtgtacgaa
tacttcgatgctaaatggagtgggtgcgggaactgcgacgtctgtaaatatcggacaacg
agagtatga
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