Leptospira borgpetersenii JB197: LBJ_0950
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Entry
LBJ_0950 CDS
T00404
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lbj
Leptospira borgpetersenii JB197
Pathway
lbj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LBJ_0950 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbj03019
]
LBJ_0950 (pnp)
03016 Transfer RNA biogenesis [BR:
lbj03016
]
LBJ_0950 (pnp)
Enzymes [BR:
lbj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LBJ_0950 (pnp)
Messenger RNA biogenesis [BR:
lbj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LBJ_0950 (pnp)
Transfer RNA biogenesis [BR:
lbj03016
]
Prokaryotic type
tRNA degradation factors
LBJ_0950 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_RRP5
TAtT
Motif
Other DBs
NCBI-ProteinID:
ABJ75593
UniProt:
Q04U27
LinkDB
All DBs
Position
1:1135350..1137440
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AA seq
696 aa
AA seq
DB search
MTHTISGQYGRDTIVLETGNWAKQAHGAVVYKSGNLVLLATVCAADDAKEGQDFFPLTCE
YTEKLYSVGRFPGGYFKREAKPPEHEILISRIIDRPIRPLFPEGYFCEVQLQVQVLSADG
DVSVAGHALNAASVALTISDIPFNGPIAGARIGRINGELILNPTTKEIVNSDLDLVVAGT
KTHIVMIEGEAKELSNEEMLSALRFAQKHIAEFVTLQEEYAKQIGVVKREVKLKARDVEL
LAKVKEYAFAKLTAANQTPDKTVRNKEISNVNKDVVEFFKQTVEDADKIKDIKTYLHELE
YEIVREQVLNQGVRFDGRRLDEIRPISVEINPLPGPHGSSVFTRGQTQSLGVVTLGTGSD
NQRYETLEGQKEKSFMLHYNFPAFSVGEVRRSSGPGRREIGHGNLAERALKLVLPKSEEF
PYVIRVVSEILESNGSSSMASVCSGSLALMAAGVPIKGSVSGIAMGLFSDSSGKYAVLSD
IAGLEDHFGDMDCKIAGTRKGITAFQMDLKVTGVSFDVLESVFEQAQRGRFHILDIMEKH
ISKASDSLAGTAPRIIVRNIPKDRIGELIGPGGKNVRGISELTGAELYIEDDGRVTISGS
NQESAEKAAKMVDGFFAEVEVGKIYEGKVKRIADFGAFVEILPGKEGLCHISKIDFKRVN
SVKDIVKEGDIIRVKVLNVDKTGKIDLSRKDALEEI
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcatacaatttccggccaatatggccgagatacgatcgttctcgaaactggaaac
tgggcgaaacaagctcacggcgcagtcgtttataaatccggaaacctagtattacttgcg
accgtttgtgccgccgatgatgcgaaagaaggacaagattttttccctcttacttgtgaa
tatactgaaaaactctattccgttggtcgttttcccggtggctattttaaaagggaagct
aaacctccggagcatgaaattcttatttccagaattatagacagaccgattcgacctctg
ttccctgagggatacttctgcgaagtgcaacttcaagtccaggttctttccgcggacgga
gacgtttctgttgcaggacacgcgctgaatgccgccagcgttgcattaacgatttctgat
attcctttcaacggaccgattgcaggtgcgagaatcggaagaatcaacggagagttgatt
ttgaatccgactacgaaggaaattgtgaactccgatttggatctggttgttgccggaact
aaaacgcatatcgtcatgattgagggagaagcgaaagagctgagcaacgaagaaatgctt
tcggctcttcgtttcgctcaaaaacatatcgccgaatttgtgactcttcaggaagaatat
gctaaacaaatcggagtcgtcaaacgagaagttaaattaaaagcccgggacgttgaactt
cttgctaaggtaaaagaatatgcgtttgcaaaactaaccgccgcaaatcaaactcccgac
aaaaccgttcgtaataaagaaatctctaacgtgaacaaagacgttgtcgagttcttcaag
caaacggtggaagatgcggacaagatcaaagatataaaaacatatctgcacgaattggaa
tacgaaatcgtgcgtgaacaagttctgaaccaaggagttcgttttgacggaagaagatta
gacgaaattcgtcctatttccgtggaaatcaatccgcttcccggccctcacggttcctcc
gtttttactagggggcagactcaatctttaggggttgttactttaggaacgggatccgac
aatcagagatacgaaactttggaaggtcaaaaagagaagtccttcatgttgcattataac
tttcctgcgttttctgtgggtgaggttcgtagatcttccggtcccggaagaagggaaatc
ggacatggaaatttggcggaacgagctctcaaattagttcttcctaagtcggaagaattt
ccgtatgtgatccgagttgtatccgaaattttagagtccaacggttccagttctatggct
tccgtttgttccggttctttggcactgatggcggcgggtgttccgattaaaggaagcgtt
tccggaattgcgatgggacttttttcggattcttccggtaagtatgcggtgttatccgat
atcgccggtttggaagatcatttcggagacatggattgtaagattgcaggaaccagaaaa
gggatcaccgcgtttcagatggatttgaaagtgaccggtgtcagtttcgatgttttagaa
agtgtattcgaacaggcacaaaggggaagattccatatcttggatattatggaaaaacat
atctccaaggcttccgatagtttagccggaaccgctcctagaatcatcgttcgaaatata
cctaaggacagaatcggcgagctcatcggtccgggtggtaaaaacgttcgaggaatcagt
gaacttacaggagcggagctctatatagaagacgacggaagagtgaccatctccggctcc
aatcaagagtccgcagaaaaagcagcgaagatggtggatggatttttcgcagaggtcgaa
gtaggaaagatatacgaaggaaaagtaaaacggattgcggatttcggagcgtttgtcgag
atccttcccggtaaagaaggtctttgtcatatctctaagatcgattttaaaagagtaaat
tccgtgaaagatatcgtcaaagaaggtgatatcattcgagtaaaggttttgaacgtggat
aagactggaaagatcgatctttccagaaaagacgctcttgaggaaatataa
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