Leptospira borgpetersenii JB197: LBJ_1306
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Entry
LBJ_1306 CDS
T00404
Symbol
uvrD-1
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lbj
Leptospira borgpetersenii JB197
Pathway
lbj03420
Nucleotide excision repair
lbj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LBJ_1306 (uvrD-1)
03430 Mismatch repair
LBJ_1306 (uvrD-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbj03400
]
LBJ_1306 (uvrD-1)
Enzymes [BR:
lbj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LBJ_1306 (uvrD-1)
DNA repair and recombination proteins [BR:
lbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LBJ_1306 (uvrD-1)
MMR (mismatch excision repair)
Other MMR factors
LBJ_1306 (uvrD-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
AAA_12
PcrA_UvrD_tudor
PhoH
CarD_TRCF_RID
ResIII
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABJ75891
UniProt:
Q04T79
LinkDB
All DBs
Position
1:1548811..1551003
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AA seq
730 aa
AA seq
DB search
MTSSFLIGLNEEQKKAVLQITGPVLILAGAGSGKTRVITHRIANLLVNHGIDRICALTFT
NKAAAEMVERVKNLVPFLPTNLQIKTFHSLCLYILRREAFFFGFDSAFTVYDTTLQESLL
KQVVKDLSLDPKFYKPSMLGNYISGLKDKMLSPETYLEKEGRTDFSKTVSAIYKEYEKRK
DANRAFDFGDLIWKTVQLFQKSPDAIAKYRHKWEYVMVDEYQDTNKVQYQLVLLLAGEKR
NLCVVGDDDQSIYSWRGADIGNILNFEKDFPESTVIKLEENYRSSSNIILAASKVISNNT
QRKQKEIFTNNPKGSPVVLNEFENESEEAHGVITRIRSAYSYGTEYKNIAIFYRTNSQSR
YFEEALRNLGIPYKIFGGFRFFDRAEIKDFIAYLSVVSNPLDSVSLLRIVNYPPRGIGDS
GIGKIREFSLEKGISLLEALGQEDIPLKKAAKSKGKELYSLFSDLIEKVEKSSSPSEIAL
ELLNRSGLVSHLRDEGTEESIARLENLQELVNSIEEYEKNSDSPSLEEYLNQISLITSEE
ESKELTDYVNLMTVHNAKGLEFKIVFLSGLEEGTFPHSMSLEDSHFGDEEERRLFYVALT
RAREQLFLSYCRTSRKFGKVEDRIPSRFLSEIPEECFVERVSREHTARSPQGAPLASKTR
RIEEKFNSGFSSTPDPTNLYLKPGDRVRHKQFGIGTIQTISGKEKNTKVSIRFGNVEKNF
FVAYTPLEKL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
ttgacttcttctttccttataggtctgaacgaagaacaaaaaaaagccgttttacagata
accggcccagtactcatcttagcgggcgcaggctcgggcaaaaccagagtcatcacacat
agaatcgcaaaccttctagtcaatcacggaattgatcgaatctgcgcgttaaccttcact
aataaggccgccgctgagatggtcgaacgagtaaaaaacttagtccctttccttccgaca
aatcttcaaattaaaacattccattctctttgtctttatatcttaaggagagaagcgttt
ttttttggatttgacagcgcgtttaccgtttacgatacgaccctccaagagtcccttctc
aaacaggtcgtaaaagacctttccttggatcctaaattctacaaaccgtctatgctcgga
aattatatcagcggtttgaaagataagatgttatctcccgaaacttatttggaaaaggaa
ggacgcaccgatttttccaaaaccgtatctgcaatttataaagaatacgaaaaaagaaaa
gatgcgaaccgtgctttcgatttcggagatctcatttggaaaacggtgcagctctttcaa
aaatccccggatgcaatcgccaaatatcgtcataaatgggaatacgtaatggtagacgaa
tatcaggatacaaacaaagtacaataccagttagtacttcttcttgcaggtgaaaaaaga
aacctttgtgttgttggcgacgacgaccaatccatttattcctggagaggagccgacatc
ggaaacattctgaatttcgaaaaggacttccccgaatccacggtcataaaattagaagaa
aattatcgttcttcatcgaatatcatccttgcggcttcaaaagtgatttcgaacaacact
cagagaaaacaaaaagaaatatttacgaataatcccaaaggttctccggttgtgttaaac
gaatttgaaaacgaatccgaggaagctcacggagtaatcaccaggatccgttccgcgtat
tcttacggaacggaatataagaatattgcaatattctacagaacaaattctcagtccaga
tattttgaggaagcgcttcggaatttaggaattccgtataaaattttcgggggtttccga
ttttttgacagggcggaaatcaaggattttatcgcttatctgagtgtggtttccaaccca
ctcgacagcgtttcacttcttcgaatcgtaaactatcctccgagaggaatcggcgattcc
ggaattggtaaaatccgtgaattttctctggaaaaaggaatttctcttttggaagccttg
ggccaagaagatattcctctcaaaaaagcggcgaaatccaaagggaaggaactctatagt
ttattcagcgatctgatagaaaaggttgaaaagagttcttccccttccgaaatcgcatta
gaacttttgaatcgttccggtctcgtttcccatttaagggacgaaggtacggaagaatcg
attgcccgtttagaaaaccttcaggaacttgttaattcgatcgaggaatacgaaaaaaat
tccgattctccttccttggaagaatatttgaatcagatcagcttaataacaagtgaagaa
gaatcaaaagaacttaccgattatgtgaatcttatgacggtacacaatgcaaaaggtctg
gaatttaagatcgtctttctttcaggtttggaagaaggtacattccctcacagtatgagt
ttggaagattctcactttggagacgaagaagaaagaagacttttttacgtcgctcttacg
cgtgctcgagaacaattgtttctaagttattgtaggacttccagaaagtttggtaaggtg
gaggacagaattccctctcgatttctgtcggaaattcctgaagaatgtttcgtagaacgt
gtaagccgggaacatactgcgagaagcccccagggagcacctttggcttctaagactagg
cgaatcgaagaaaaatttaatagcggcttttcatctacacccgatcctactaatctctat
ctaaagccgggagaccgggtaagacacaaacaattcggaatcgggacaattcagacgatt
tcgggaaaagaaaaaaatacgaaagtttccattcgtttcggaaacgttgagaaaaacttt
tttgttgcctataccccactcgagaaattataa
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