Leptospira borgpetersenii JB197: LBJ_3001
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Entry
LBJ_3001 CDS
T00404
Symbol
dnaX-2
Name
(GenBank) DNA polymerase III, gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lbj
Leptospira borgpetersenii JB197
Pathway
lbj03030
DNA replication
lbj03430
Mismatch repair
lbj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBJ_3001 (dnaX-2)
03430 Mismatch repair
LBJ_3001 (dnaX-2)
03440 Homologous recombination
LBJ_3001 (dnaX-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbj03032
]
LBJ_3001 (dnaX-2)
03400 DNA repair and recombination proteins [BR:
lbj03400
]
LBJ_3001 (dnaX-2)
Enzymes [BR:
lbj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBJ_3001 (dnaX-2)
DNA replication proteins [BR:
lbj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LBJ_3001 (dnaX-2)
DNA repair and recombination proteins [BR:
lbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LBJ_3001 (dnaX-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
AAA_5
AAA_22
AAA_14
RuvB_N
TIP49
AAA_16
AAA_30
AAA_7
AAA_18
DNA_pol3_gamma3
Rad17
ResIII
nSTAND3
AAA_19
Mg_chelatase
AAA_2
AAA_24
AAA_28
DEAD
SKI
TsaE
RNA_helicase
ABC_tran
Glyco_tranf_2_5
DEXQc_Suv3
Motif
Other DBs
NCBI-ProteinID:
ABJ77389
UniProt:
Q04NY1
LinkDB
All DBs
Position
1:3557532..3558995
Genome browser
AA seq
487 aa
AA seq
DB search
MTGTHEVLSRKYRPQIFRDVIHQDLAIGALQNALKSGKIGHAYIFFGPRGVGKTTIARIL
AKRLNCRNPINNEPCNECSSCTEITQGISSDVLEIDAASNRGIENIRELRDNVKFAPMGG
KYKVYIIDEVHMLTDQSFNALLKTLEEPPAHIVFILATTEFHKIPETILSRCQDFIFKKV
PLSVLQDYSEKLCKIENVQYDQEGLFWIAKKGDGSVRDMLSFMEQAIVFTDSKLSGTGIR
KMIGYHGIEFLTSFIKSLIDPDNHSKSLEILESLYQEGQDIYKFLWDSIEFTHTLNLIRD
SLADSESVNFPKEDLAKMKSDFENVDSSKLNFLSGKLFEIYEKIKTIRLRNSFEIKVFTE
IQIKKLVEELTYPSLAGLVDRINHLILMMQGSKNSTLDTEHAKSLPIPKSVAQEESSKKK
DNSFSDISLGSRFESNQQDSSLRNDSLETKSTITSEPNLQKFDTSTEIKKKFLGTEVDQS
KIPKLDS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaactcacgaagtcctttctcggaaataccgcccgcaaatatttcgggacgta
attcatcaagaccttgccataggcgctcttcaaaacgcacttaaatccggaaaaatcggt
catgcatatattttcttcggtcctagaggagtcggtaaaacgacgatcgcgagaattctt
gcaaaacgattgaattgccgaaatccgatcaataatgaaccttgcaacgaatgtagttct
tgtaccgaaatcactcaggggatttcgagcgacgttcttgaaatcgatgccgcgagcaat
cgaggaatcgaaaatattcgtgaactcagagacaatgttaaattcgcccccatgggcgga
aaatataaagtttatataatagacgaagtccacatgttgacggatcagtccttcaacgct
cttctaaaaactttggaagaacccccggctcacattgtttttattttggccacaactgag
tttcataaaattccagagaccattctttccagatgtcaggattttatctttaaaaaagta
cccttgtccgttttacaggattattccgaaaaactttgtaagatcgaaaatgtccaatac
gatcaagaaggacttttctggattgcgaaaaaaggcgacggttccgtaagagacatgctt
tcttttatggaacaggcgatcgtatttacggattccaaattgtcaggaaccggaatccgc
aagatgatcggttatcacggaattgaatttttaacttcgttcatcaaaagtcttatcgat
cccgacaatcattcaaaaagtttggaaatcctcgaatccctctatcaagaaggtcaagat
atctacaaatttttatgggattccatagaatttactcacactcttaacttgatccgcgat
tcccttgccgattccgaatccgttaattttcccaaagaagatctggcaaaaatgaaatct
gattttgaaaatgtggattcttcaaaattgaattttctttccggaaaactttttgaaatt
tacgaaaaaatcaaaacgattcgtttgagaaactcttttgagattaaagtattcacagaa
attcaaatcaaaaaactcgtggaagaacttacctatccgagtttggccggtttggtagat
cgaatcaatcatctgattcttatgatgcaaggttctaaaaattccactctcgatacggaa
cacgctaaatcacttcctatacccaaaagtgtggcacaagaagaatcttctaaaaaaaaa
gataattcgttttccgacatctctttaggatcccgcttcgagtctaatcagcaggattct
tctttgagaaacgattccttggaaacaaaatcgactataacttccgaaccaaatttgcaa
aaattcgatacgagtaccgaaataaagaaaaaatttctcggaaccgaagtagatcaaagt
aaaatccctaaattggattcttaa
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