Levilactobacillus brevis KB290: LVISKB_0453
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Entry
LVISKB_0453 CDS
T02528
Name
(GenBank) Helicase IV
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lbk
Levilactobacillus brevis KB290
Pathway
lbk03420
Nucleotide excision repair
lbk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LVISKB_0453
03430 Mismatch repair
LVISKB_0453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbk03400
]
LVISKB_0453
Enzymes [BR:
lbk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LVISKB_0453
DNA repair and recombination proteins [BR:
lbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LVISKB_0453
MMR (mismatch excision repair)
Other MMR factors
LVISKB_0453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
UvrD_C
NACHT
SLFN-g3_helicase
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BAN06088
UniProt:
M5ABB5
LinkDB
All DBs
Position
complement(468073..470418)
Genome browser
AA seq
781 aa
AA seq
DB search
MLGTLAYPKEAVSLTTSEEAQEQQRVDQVAHAIGQRIAKTDADYQAAHQELRNVLQNYSE
NTSVNWFEVDDRIETSAELQQQRALVSRLTENQNIIQDQLDTFKNLQKSPYFGRIDIQDP
GETDSESLYIGTASFVDDDQNFLVYDWRAPISSIYYNGVLGQVAYHTPAGDQQTKLLKKR
QFLIQDGQIESMFDTNETVGDEMLQHALGEQNDATMQNIVATIQREQNDIIRDTRSDLLV
VQGVAGSGKTSAILQRIAFLLYHSRRDLEADQIVLFSPNRLFSHYISDVLPSLGERNMRQ
VTLAEFLTQRFQGLTVQTQFDRYETDQQHPVNLSLRNFQESAALMTAINEYCHQCTADDL
LFTDIRFHGRVFFSKEEIRDIYRQFPTAAAPADRFLRTKNELEKRLKQRIAEEAKADWVH
DTIDQLSDEDYHNLLGEKHLGKFEQLDDEIDYIARQIVRRRLRQVDDAIYNGYFLDAYSQ
YTAFLKQCPLPEDVTSTDWQTAIASYQHDIEFHHLALTDAAPLLYLRDILIGGGANHRMQ
HLFVDEMQDYSMAQLIYLQHAFPRAKLTLLGDSEQALFKAVESPESILKKLNAALNIKRS
RLITLRRSYRSTLPITTFAKALLPDGDQIEAFNRPGDLPKVVIRYDEAVAFKALAHELKL
ELATNGTVAILTKSTAEAKLVYQKLHADFDLTRLTDTDRSLPKGVVVLPIYLAKGLEFDS
VIAYNVSAENYPDEQLTGTLYTIASRAMHHLTLLCIGAASPLIASGKIPQADLQIEHEFQ
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
ttgttaggcactttagcctatccaaaggaggcggtcagtttgaccaccagcgaagaagca
caagaacaacagcgtgttgatcaggttgctcacgccattggtcaacgcatcgccaaaacc
gatgcggactaccaagcggcccatcaagaactacgtaacgtgttgcaaaattacagcgaa
aacacctcggttaactggttcgaagtcgatgaccgaatcgaaaccagtgccgaactccaa
caacaacgggcattagtttctcgtttaactgaaaatcaaaatatcattcaagatcaatta
gatacgtttaaaaacttacaaaaatctccgtactttggtcgcatcgatatccaagatccc
ggtgaaaccgacagcgagtcactttacattggcactgcctcgttcgttgatgacgatcaa
aatttcttagtttatgactggcgggcccctatttctagtatttattacaatggggtctta
ggacaggtcgcctatcacaccccagctggtgaccagcagaccaagctactcaagaagcga
cagtttctgattcaagatggtcaaattgaaagtatgtttgacaccaacgaaaccgttgga
gatgaaatgctgcagcacgctttgggtgagcaaaacgacgccaccatgcaaaatattgtg
gcaaccatccaacgggaacaaaatgatattattcgtgacacccgcagtgacctattagtg
gttcaaggggttgccggttccggtaagacatcggccattttacagcggattgctttcctg
ctatatcacagtcggcgcgatcttgaggctgatcagatcgtcttattctcacctaatcgg
ttgttcagccactacattagtgacgttctgcccagcctcggtgagcgcaacatgcgccaa
gtcaccctagccgagttcctaacgcaacggttccaaggcttaacggtgcaaacgcaattc
gaccgttacgaaactgatcagcaacatcccgtaaacctctccttacgaaacttccaagaa
agtgccgccttgatgacagctatcaacgagtactgtcatcaatgtacggctgatgattta
ctgtttacggatatccggtttcatggtcgggtgttcttttcaaaagaagaaattcgtgat
atctatcgccaatttccaactgcggcagcaccagctgatcgcttcttgcgtaccaaaaat
gaactggaaaagcgcttgaagcagcggatcgctgaagaagccaaggccgactgggtccac
gacaccatcgaccaactcagtgacgaggactatcacaacctcttaggcgaaaaacacttg
ggtaaatttgaacagctcgacgatgagatcgactacatcgctcggcaaatcgttcgccga
cgcttgcgacaagtcgatgacgctatttataatgggtactttttagacgcgtatagccaa
tacactgcctttttgaaacagtgtccgttaccagaagatgtcacctctactgactggcaa
accgccatcgcgagttaccaacatgatatcgaatttcaccatctcgccttaacggatgct
gccccactattgtaccttcgtgatattttaattggcggtggtgctaatcaccgcatgcag
catttatttgttgatgaaatgcaagattactccatggcgcaactcatttatttacaacac
gcctttccacgagccaagctcaccttattgggtgacagcgaacaggccttattcaaagcc
gttgaatcgccggaaagtattctcaaaaaactcaatgccgcactaaatatcaagcgctcg
cgtctgatcaccttgcgacgctcctaccgctcaacgttacccatcacaaccttcgcgaag
gctttactccccgatggtgatcagattgaagcctttaaccggccgggcgacctgcccaaa
gtggtcattcgctacgatgaagcagtggcgttcaaagccttggctcacgaacttaaatta
gaattagcaaccaatggaacggtcgctattctgacaaaaagcacggctgaagccaagctc
gtgtaccaaaagctccatgccgactttgatctaacccggttaacggataccgaccgatca
ctgcctaagggtgttgtggtcttacctatctacctggccaagggcttagagttcgatagc
gttatcgcctacaatgtctccgccgaaaattacccagatgagcaattaaccgggacgctg
tataccatcgcatcacgagccatgcatcacctgacactattatgcatcggtgctgcatcc
cctctgattgcctctggtaagattccgcaagcagacttacagattgaacatgaatttcag
aattag
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