Levilactobacillus brevis KB290: LVISKB_0613
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Entry
LVISKB_0613 CDS
T02528
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lbk
Levilactobacillus brevis KB290
Pathway
lbk03030
DNA replication
lbk03430
Mismatch repair
lbk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVISKB_0613
03430 Mismatch repair
LVISKB_0613
03440 Homologous recombination
LVISKB_0613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbk03032
]
LVISKB_0613
03400 DNA repair and recombination proteins [BR:
lbk03400
]
LVISKB_0613
Enzymes [BR:
lbk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVISKB_0613
DNA replication proteins [BR:
lbk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVISKB_0613
DNA repair and recombination proteins [BR:
lbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVISKB_0613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
DNA_pol3_gamma3
AAA_30
AAA_assoc_2
TIP49
AAA_5
AAA_22
DnaX_C
AAA_19
AAA_24
AAA_2
AAA_16
AAA_14
AAA_7
Mg_chelatase
PIF1
RNA_helicase
Sigma54_activat
DUF4466
DUF6779
Rad17
Motif
Other DBs
NCBI-ProteinID:
BAN06248
UniProt:
M5ABQ3
LinkDB
All DBs
Position
643099..644829
Genome browser
AA seq
576 aa
AA seq
DB search
MAYQALYRVWRPQQFKDMIGQEVVTRTLKNAITTKQISHAYLFAGPRGTGKTSAAKIFAK
AINCHHQTDGEPCNECDTCQAITNGTLNDVIEIDAASNNGVEEIRDIRDKVKYAPTVADY
KVYIIDEVHMLSTGAFNALLKTLEEPPANVIFILATTEPHKIPATIISRTQRFDFKRIAA
SDSYSRMTYILDQKGVTYDEQALKVIAKAAEGGMRDALSILDQALSFGDNEITLDNALLV
TGSVTHELLATYMQQVVAGDTKAALATLQSVLEAGKDAERFSEDVIGYARDLLLYQQAPQ
MVEEAEMGSVSEDFQTLAQQTPASAMYAMINELNAIQQQMRYTTHPDVYLEILTIKLAEI
GRQKTASTTAPTGTATATEQPAANASELANLQREVEQLRTTVKHLEQTPATPKATAKPRT
TKQVPVKEVNLAKIYPVLGAATRDKLNQLQEVWPDILNSLSTSQRAVMKVSQPVAAADSG
VIVAFDYSFLYQRATSDQELTDALENGMDRMIGTALPVVFVPKEEWPTIRKNYLTAHKDE
LQNTNHEPAESQAPQPNPVVAKAEELFGSVVDVKAD
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaagcactttaccgggtgtggcgcccgcaacagtttaaagatatgatcggg
caagaagtggtcacacgtacgctaaaaaatgccattaccactaaacaaattagtcatgcc
tacctgtttgccggccctcgaggaacggggaaaacgtcggcagctaagatttttgctaag
gcgattaactgtcatcatcaaacggatggtgagccgtgtaatgaatgtgacacctgtcag
gcgattaccaatggcaccctgaatgatgtgattgaaatcgatgcggcttccaataatggg
gtcgaagaaattcgtgatattcgcgataaggttaaatacgcgccaaccgttgcggattat
aaagtctatatcatcgatgaagtgcatatgttgtcaactggggcgttcaatgcactgttg
aaaacgttggaagagccaccggccaatgtgatctttattttagctacgacggaaccgcat
aagattcccgcaaccattatttcgcgaacccaacgctttgattttaaacggattgcggcc
agcgatagttatagtcggatgacttacatcttggatcaaaagggtgtgacgtacgacgaa
caggcgcttaaggtcattgctaaggcggccgaagggggcatgcgggatgcattgagcatt
ttggatcaagccctgtcgtttggtgataatgagatcactttggataatgccttgctggtg
acgggaagtgtgacccatgaattgctggcgacttacatgcaacaggtcgtggcgggtgac
acgaaagcggccttagcgactttacaatcggtcttagaggcgggtaaggatgcagaacgc
ttcagcgaagacgtgattggttacgcgcgggatctgttgctgtatcaacaagcgccccag
atggtggaagaagccgagatggggagtgtcagcgaagacttccagacattggcccaacaa
acaccggcttctgcgatgtatgccatgattaatgaattgaatgcgattcaacaacagatg
cgctacacgacccatccggatgtgtatttggaaatcttgactatcaagttggccgaaatt
ggtcgacaaaagactgcgtcaacgacagcaccaaccggaacagctacggcaacagagcag
ccagccgctaacgctagcgaactggccaacttgcaacgtgaagttgaacaattacggacg
acggttaagcatctggaacagacaccggcaacgcctaaggctacagcaaaaccgcggaca
accaagcaggtaccggttaaagaggtcaacttagcgaagatttatccagttttgggggcg
gctacccgggataagttgaatcaattgcaagaggtttggccggatattctaaatagtcta
tcaacctcgcaacgggcagtgatgaaggtctctcaaccggttgcggcggcggattcaggt
gtcattgtggcgtttgattattctttcttgtaccaacgagcgacgtcagatcaagaactg
acagacgcactagaaaatgggatggatcggatgattgggaccgctttgcctgtggtgttt
gttccgaaagaagaatggccgacaattcggaagaattatttgacggcgcataaggatgag
ttgcaaaatacgaatcatgaaccggctgaaagtcaggcaccacaaccgaatccggttgtg
gcaaaagcagaagaattgtttggtagcgtcgttgacgtgaaagcagattaa
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