Levilactobacillus brevis KB290: LVISKB_0845
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Entry
LVISKB_0845 CDS
T02528
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lbk
Levilactobacillus brevis KB290
Brite
KEGG Orthology (KO) [BR:
lbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbk03019
]
LVISKB_0845
03009 Ribosome biogenesis [BR:
lbk03009
]
LVISKB_0845
Enzymes [BR:
lbk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LVISKB_0845
Messenger RNA biogenesis [BR:
lbk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LVISKB_0845
Ribosome biogenesis [BR:
lbk03009
]
Prokaryotic type
rRNA helicases
LVISKB_0845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Peripla_BP_2
Motif
Other DBs
NCBI-ProteinID:
BAN06480
UniProt:
M5ADJ2
LinkDB
All DBs
Position
872751..874109
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AA seq
452 aa
AA seq
DB search
MTADFKNFNLQPYLMTALQKIGFQQPTAVQEKLIPVISAGHDVVGQSQTGSGKTHTFLLP
IFNQLTSENQVQAVITTPSRELAYQIRTAAEQLAAEAPFEIRIGNYVGGTDKQRQIEKLR
HYQPQLVIGTPGRVQDLIQSQALDVHTTRQFVVDEADMTLDLGFLDQVDKIAGRMPKNLQ
MMVFSATIPQRLDPFLRKYMNHPVVEEIPTATVISSTIDNWLISTKGQNKNQLIYQLITM
GEPYLVLIFANTKTRVEQIHDFLQSQGLKVAMIHGGIKPRERKRVMREVKNLQFQFVVAT
DLAARGIDIEGVSHVINDDIPEDLDFFVHRVGRTGRQGMPGTAITLYSPDEEAKIAEIEA
MGIKFQPKRISNGEIVDSYDRNRRQKRVKSTEKLDPTLIGLVKKKKKKIKPGYKHQIKQA
IHRKKDQERRIAQRQSARSERKRRKRESDRYQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagattttaaaaattttaacttgcagccgtatctgatgacggcgctacaaaag
attgggtttcaacagccaaccgctgttcaggaaaaactaatcccagtaattagtgctggc
cacgatgtcgttggtcagtcacaaaccgggagtggtaagacccatacgttcttactaccc
atctttaatcaattgacttctgagaaccaagtacaagccgtaattaccacgccaagccgt
gaactggcttaccagattcgtacggcggcggaacaattggcggcggaagccccctttgaa
attcgcattggaaactacgttggtggaacggataaacaacgacaaattgaaaagctgcgg
cattaccaaccacaactggtgattgggacgcctggtcgggtgcaagacttgattcaatca
caggcgttggacgtgcatacgactcgtcagtttgtggtcgatgaagccgatatgacgttg
gatctgggcttcttagatcaagtggacaaaatcgctggcagaatgccgaaaaacctgcaa
atgatggtcttttcagccacaattccccaacggttagatccgtttttgcgtaaatatatg
aatcatccggttgttgaagaaattccaacggcaactgtgattagttctacaattgataat
tggttgatttcaaccaagggtcaaaacaagaaccagttaatttatcaattaattacgatg
ggggaaccctatctggttttaatcttcgcgaatacgaagacccgggttgaacagattcat
gactttttgcaatcgcaagggctaaaggttgccatgattcatggggggattaagccgcgt
gaacgtaaacgggtcatgcgtgaagtgaagaatcttcaattccaattcgttgtcgcaacg
gatctggcggcacggggtattgatattgaaggtgtttcacacgtcattaatgatgatatt
cctgaagatttggatttctttgttcaccgggttggccggacggggcggcaaggtatgcca
ggaacggcgattaccttgtattcaccagatgaagaagccaagattgccgagattgaagcc
atggggattaagttccaacctaaacgaatcagtaatggtgaaattgtggattcctatgac
cggaatcggcggcaaaaacgggttaagagtacggaaaagctagatccaactctgattggt
ttagtcaagaagaagaagaaaaagatcaagccagggtataagcatcagatcaagcaagca
attcaccgcaagaaagatcaggaacggcggattgcgcaacggcagagtgcgcgaagtgaa
cggaaacggcgtaagcgtgaatccgatcgttatcaataa
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