Levilactobacillus brevis KB290: LVISKB_0930
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Entry
LVISKB_0930 CDS
T02528
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lbk
Levilactobacillus brevis KB290
Pathway
lbk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LVISKB_0930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbk03400
]
LVISKB_0930
Enzymes [BR:
lbk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LVISKB_0930
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LVISKB_0930
DNA repair and recombination proteins [BR:
lbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LVISKB_0930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
DZR
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
BAN06565
UniProt:
M5ADT2
LinkDB
All DBs
Position
963337..964197
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AA seq
286 aa
AA seq
DB search
MPELPEVETVRRGLTRLVQGATIAHVEVRYPKMVTPDADVFTAELISRKIERIDRRGKYL
LFRFSGDLTMVSHLRMEGKYDVQPEGSPVSKHTHVIFHLTDNRELRYTDTRKFGRMQLVP
TGEETTLAPSLGKLGPEPTAETLTLAYMVKIFGKSHKVVKPFLLDQTRIAGLGNIYADEV
LWLSKINPLTPVDTLTPSQLSELRQNIIDEMALAIGGHGTTVHSFSTAFGEAGQFQNQLH
VYGREGEPCERCGTELVKIKVAQRGTHFCPHCQPLPPEAKAALIHD
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacctgaagttgaaacggttcgacgcgggttgacgcgattggttcaaggg
gccactattgctcacgttgaggttcgttatccaaaaatggtcacacctgacgcggatgtc
tttaccgcggaattaatcagccggaaaattgagcggattgatcggcgaggaaaatacctg
ttattccgatttagtggtgacttaacgatggtgtcacacttgcgtatggaaggaaagtat
gacgtccagccagaaggtagccccgtttccaagcatacgcatgtgatctttcatttaact
gataatcgggagttgcgttataccgatacccggaagtttggccgaatgcaattagtgccg
acgggcgaagaaacaacgctggccccctcattgggcaaattgggaccggaaccaacggcg
gagaccttaacgttagcgtatatggtcaaaatctttggtaagtcacataaagtggtgaag
cctttcttattagatcagacgcgaattgctggattggggaatatctatgcagacgaggtc
ctgtggttatctaagattaatccactaacgccagtagatacgttaacgccgtctcaattg
tcggagctacgccaaaatattattgatgagatggctttagccattggggggcatggcacg
acagtccattcattttcgacagcgtttggtgaggctggtcagtttcaaaatcagttgcat
gtctatggccgagaaggtgaaccgtgcgaacggtgtggaacagaattggttaagattaag
gtggcccagcgtggtacgcatttctgcccgcactgccagccattaccaccagaagcaaag
gcggcgttgattcatgactga
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