Levilactobacillus brevis KB290: LVISKB_1944
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Entry
LVISKB_1944 CDS
T02528
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lbk
Levilactobacillus brevis KB290
Brite
KEGG Orthology (KO) [BR:
lbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbk03400
]
LVISKB_1944
DNA repair and recombination proteins [BR:
lbk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LVISKB_1944
Archaeal homologous recombinant proteins
LVISKB_1944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
AAA_21
Motif
Other DBs
NCBI-ProteinID:
BAN07579
UniProt:
M5AFH6
LinkDB
All DBs
Position
complement(1965053..1968202)
Genome browser
AA seq
1049 aa
AA seq
DB search
MTPVTLHLEYFGPYRDATIDFTRFMTTPLFLISGKTGSGKTTIFDGMCYALFDQTSGTDR
KAPAMRSDFATAADRTRVTFTFTHRDRRYEIIREPAQTLNKKRGQGLTDVAAAVTLTVYA
DDREVTQLTKTNQVRDYLQELLQMDGKQFSQIVLLPQGQFRQFLIAPSEEKAAVLEQLFN
TEIFARWTEQLKQQLKKDQATSQTTAAEVTRLLASLQWTSENEEAAQTLIAAQRPEPVVT
LMAAQQATTREQQAQLERRLATAQATVDRLVRQDEQEQSLLKDRQQLTQYRQQATELAQQ
APAMDNLQTTVTALEWVQTRQPAWQEREQAQQAQQQRQADQQQAQQDLMAAQTALKQAQA
AVEQHQTLSAKITATTETLAQWRALEPIYQRVATLEQDLQQAQQDAEKRQIAYQQAQTAW
TTNQQAQTQQRAILDQQAEIYARQTKLLQQANDLADAQSQAATLQQQVGQQADLTQQVSQ
ITGRLQTAQSAAQTAHDRAAARYQVFLRHQIITLSAQLTPGTPCPVCGSTTHPQPAQATV
TETATEDDVKRAQDQAIHATQQADQLAAQLTTLQQQLNANQQEHQTALQALRAQLSVADT
MDLTAMAAILTQRCQEQQQAEQANQEQRAALKQAQTQITQLTEAAVELQEKVTQAQQTVQ
QQTTTVDKLATTLTTEQQRLPADAPTRTEYLARVQKLQDQLAVDQQMWTAIEQQYQTAQQ
TVLVAQDRLATATKEVTQSDQRVARAQADLAAQLAHPVAPLATDTEAQVARWLPQVATLP
VKREQLQTFQAQQARLATLIETLSKRLQGQAKPDREATQSALIEANQAVTTLREQERQLK
NLLEQNEQATQRLRAVLDQQATALQQTQELTELAGVVNGDGPNSKLGLERYVLQTYLRQI
LTVGNQRFQQLTNGRYQFVIDETPAASKKRSGLEINVYDDHVGEQRSVHTLSGGESFIAS
LALALALGEVIQQTTGSVDVDALFIDEGFGSLDEDALMTALESLETIEGRHRMIGIISHV
SELRDQVADQLQVVANGNGESTIRYHAAD
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgacaccagtaaccttacacttggaatattttggcccgtatcgggatgcgacaatcgac
ttcacccgatttatgacgacgccactgttcttaatcagcggaaaaacggggagcggaaaa
accacaattttcgatggcatgtgttatgccttgtttgaccagacttcaggtaccgatcgc
aaggctccggctatgcgatcggattttgctaccgccgcggatcgaacccgtgtcaccttt
acgtttacccatcgtgatcggcgatatgagattattcgtgagcccgcccagacgttgaac
aaaaaacgtggtcaggggttaacagatgtggcggcggcagtgacgctgacagtctatgct
gatgatcgggaagtcacgcaactgacaaaaaccaaccaagtcagagactatctgcaagag
ttattacagatggacggcaaacaattctcccagatagttttattgcctcaaggccaattt
cgccaattcttaattgcacctagtgaagaaaaagcggcggttttagaacaactctttaat
actgaaatttttgcccgctggacggaacaactcaagcagcaactaaagaaagatcaagcc
accagtcagaccaccgcagcagaagttacccgattattggcgagcctgcagtggacttct
gaaaatgaagaagctgcccagactctaatcgctgcgcaacgtccagagccggtagtgact
ttaatggcggcccagcaggcaacaacccgagaacaacaagcacaattagaacgacggttg
gcaacggctcaggcgaccgtagatcggttggttcgccaagatgaacaggagcaaagccta
ttaaaagatcgccaacagttgacacagtaccgtcagcaggccaccgagctcgcacagcaa
gcaccagccatggataacttgcaaacgacagtaaccgcgttggagtgggttcaaactcgc
caaccagcttggcaagaacgcgagcaggcgcaacaggcccaacagcaacgacaggctgac
cagcaacaagcacagcaggacttgatggctgcccagacggcactcaagcaggcccaagcg
gcagtcgagcagcatcaaaccttatcagcaaagataaccgcaactacggagaccttggcc
cagtggcgtgccttagagcctatttatcagcgggtagccaccttagagcaggatctccag
caggcccagcaagacgctgaaaagcggcaaatcgcttatcaacaggcgcaaacggcttgg
acgacgaatcaacaagcgcaaacgcagcaacgggcgattttagaccaacaagcggagatc
tatgcgcggcagacgaaactactgcaacaagcaaatgacttagcagatgctcaaagtcaa
gcagcaaccttacagcaacaagttgggcaacaggccgacttaactcagcaagtttcgcaa
ataacgggacgtttacagacagcccaatcagccgcccaaacggcacatgaccgggcagca
gcccgataccaggttttccttcggcatcaaattattaccttgagtgcgcaattaaccccc
ggaacgccgtgtccagtatgtggatcgacaacccacccgcaaccagcacaggcaacggta
actgagacagccaccgaggatgatgtcaaacgggcacaggatcaagcgatacacgcgacg
cagcaggctgatcaactggccgcccagttgacgacgttacaacaacaattgaacgctaac
cagcaggaacatcaaacggcgttgcaagcgttacgggcccaactatcagtggcagatacg
atggacctgaccgcaatggcggcgattttaacgcagcgttgccaggaacagcaacaggct
gaacaggccaatcaagaacaacgagccgctttgaaacaggcacaaacacagatcacgcag
ttaactgaagcggccgtggaacttcaggaaaaggtgacacaagcccaacagaccgtgcaa
caacaaaccacgacggttgataaactcgccaccactttgaccacggaacaacaacgattg
ccagctgatgcgccgactcgaacagaatatttagcgcgggtccagaaattacaggatcaa
ttggcggtggatcagcaaatgtggacggccatagagcagcaataccagactgcccaacag
acggttcttgtggcccaagatcgactggcgacagcaactaaggaagtcacacaaagtgat
cagcgggtggcaagggcgcaagctgatttggccgcacagctcgctcatccggtcgcgccg
ttagcgacggatacggaagcacaagttgcccgttggttgcctcaggttgcgaccttgcca
gttaaacgagagcaactacaaacctttcaagcccaacaggcccgcctagcaaccctgatt
gaaacgttgtcaaaacgccttcagggacaagccaaaccagatcgtgaagcaacacagtcg
gctttaatcgaagccaaccaggcggtcactaccttacgggagcaagagcgccaattgaaa
aacttattagagcaaaatgagcaagcgacgcagcgattacgggcggtattagaccagcaa
gcaacggcacttcaacaaacccaagagctgacggaattagcaggtgtggtcaatggtgat
ggaccaaatagcaaattgggattagagcgctatgttctacagacatatttgcgtcaaatt
cttaccgttggtaatcagcgattccagcaacttactaacggccggtatcaatttgttatt
gatgaaacacctgctgcgtctaagaaacgctctggattggaaatcaatgtgtatgacgac
catgttggcgaacagcgaagcgtgcatacgttatcggggggtgaaagttttatcgcgtcc
ctagcgttagccttggcgttaggtgaagtcatccagcaaacgacagggagtgtagatgtg
gatgccttgttcattgatgagggctttggttctttagatgaggatgctttaatgacagca
ttggaatcattagaaacgattgagggacgccaccggatgattggcattatcagtcatgtg
agcgaacttcgtgaccaagttgccgatcaactacaagtggttgcgaatggcaacggggaa
agtacgattcgttatcatgcagcggattaa
DBGET
integrated database retrieval system
