Entry |
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Name |
(GenBank) Nuclease sbcCD subunit C
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KO |
K03546 | DNA repair protein SbcC/Rad50 |
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Organism |
lbk Levilactobacillus brevis KB290
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Brite |
KEGG Orthology (KO) [BR:lbk00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:lbk03400]
LVISKB_1944
DNA repair and recombination proteins [BR:lbk03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LVISKB_1944
Archaeal homologous recombinant proteins
LVISKB_1944
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(1965053..1968202)
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AA seq |
1049 aa
MTPVTLHLEYFGPYRDATIDFTRFMTTPLFLISGKTGSGKTTIFDGMCYALFDQTSGTDR
KAPAMRSDFATAADRTRVTFTFTHRDRRYEIIREPAQTLNKKRGQGLTDVAAAVTLTVYA
DDREVTQLTKTNQVRDYLQELLQMDGKQFSQIVLLPQGQFRQFLIAPSEEKAAVLEQLFN
TEIFARWTEQLKQQLKKDQATSQTTAAEVTRLLASLQWTSENEEAAQTLIAAQRPEPVVT
LMAAQQATTREQQAQLERRLATAQATVDRLVRQDEQEQSLLKDRQQLTQYRQQATELAQQ
APAMDNLQTTVTALEWVQTRQPAWQEREQAQQAQQQRQADQQQAQQDLMAAQTALKQAQA
AVEQHQTLSAKITATTETLAQWRALEPIYQRVATLEQDLQQAQQDAEKRQIAYQQAQTAW
TTNQQAQTQQRAILDQQAEIYARQTKLLQQANDLADAQSQAATLQQQVGQQADLTQQVSQ
ITGRLQTAQSAAQTAHDRAAARYQVFLRHQIITLSAQLTPGTPCPVCGSTTHPQPAQATV
TETATEDDVKRAQDQAIHATQQADQLAAQLTTLQQQLNANQQEHQTALQALRAQLSVADT
MDLTAMAAILTQRCQEQQQAEQANQEQRAALKQAQTQITQLTEAAVELQEKVTQAQQTVQ
QQTTTVDKLATTLTTEQQRLPADAPTRTEYLARVQKLQDQLAVDQQMWTAIEQQYQTAQQ
TVLVAQDRLATATKEVTQSDQRVARAQADLAAQLAHPVAPLATDTEAQVARWLPQVATLP
VKREQLQTFQAQQARLATLIETLSKRLQGQAKPDREATQSALIEANQAVTTLREQERQLK
NLLEQNEQATQRLRAVLDQQATALQQTQELTELAGVVNGDGPNSKLGLERYVLQTYLRQI
LTVGNQRFQQLTNGRYQFVIDETPAASKKRSGLEINVYDDHVGEQRSVHTLSGGESFIAS
LALALALGEVIQQTTGSVDVDALFIDEGFGSLDEDALMTALESLETIEGRHRMIGIISHV
SELRDQVADQLQVVANGNGESTIRYHAAD |
NT seq |
3150 nt +upstreamnt +downstreamnt
atgacaccagtaaccttacacttggaatattttggcccgtatcgggatgcgacaatcgac
ttcacccgatttatgacgacgccactgttcttaatcagcggaaaaacggggagcggaaaa
accacaattttcgatggcatgtgttatgccttgtttgaccagacttcaggtaccgatcgc
aaggctccggctatgcgatcggattttgctaccgccgcggatcgaacccgtgtcaccttt
acgtttacccatcgtgatcggcgatatgagattattcgtgagcccgcccagacgttgaac
aaaaaacgtggtcaggggttaacagatgtggcggcggcagtgacgctgacagtctatgct
gatgatcgggaagtcacgcaactgacaaaaaccaaccaagtcagagactatctgcaagag
ttattacagatggacggcaaacaattctcccagatagttttattgcctcaaggccaattt
cgccaattcttaattgcacctagtgaagaaaaagcggcggttttagaacaactctttaat
actgaaatttttgcccgctggacggaacaactcaagcagcaactaaagaaagatcaagcc
accagtcagaccaccgcagcagaagttacccgattattggcgagcctgcagtggacttct
gaaaatgaagaagctgcccagactctaatcgctgcgcaacgtccagagccggtagtgact
ttaatggcggcccagcaggcaacaacccgagaacaacaagcacaattagaacgacggttg
gcaacggctcaggcgaccgtagatcggttggttcgccaagatgaacaggagcaaagccta
ttaaaagatcgccaacagttgacacagtaccgtcagcaggccaccgagctcgcacagcaa
gcaccagccatggataacttgcaaacgacagtaaccgcgttggagtgggttcaaactcgc
caaccagcttggcaagaacgcgagcaggcgcaacaggcccaacagcaacgacaggctgac
cagcaacaagcacagcaggacttgatggctgcccagacggcactcaagcaggcccaagcg
gcagtcgagcagcatcaaaccttatcagcaaagataaccgcaactacggagaccttggcc
cagtggcgtgccttagagcctatttatcagcgggtagccaccttagagcaggatctccag
caggcccagcaagacgctgaaaagcggcaaatcgcttatcaacaggcgcaaacggcttgg
acgacgaatcaacaagcgcaaacgcagcaacgggcgattttagaccaacaagcggagatc
tatgcgcggcagacgaaactactgcaacaagcaaatgacttagcagatgctcaaagtcaa
gcagcaaccttacagcaacaagttgggcaacaggccgacttaactcagcaagtttcgcaa
ataacgggacgtttacagacagcccaatcagccgcccaaacggcacatgaccgggcagca
gcccgataccaggttttccttcggcatcaaattattaccttgagtgcgcaattaaccccc
ggaacgccgtgtccagtatgtggatcgacaacccacccgcaaccagcacaggcaacggta
actgagacagccaccgaggatgatgtcaaacgggcacaggatcaagcgatacacgcgacg
cagcaggctgatcaactggccgcccagttgacgacgttacaacaacaattgaacgctaac
cagcaggaacatcaaacggcgttgcaagcgttacgggcccaactatcagtggcagatacg
atggacctgaccgcaatggcggcgattttaacgcagcgttgccaggaacagcaacaggct
gaacaggccaatcaagaacaacgagccgctttgaaacaggcacaaacacagatcacgcag
ttaactgaagcggccgtggaacttcaggaaaaggtgacacaagcccaacagaccgtgcaa
caacaaaccacgacggttgataaactcgccaccactttgaccacggaacaacaacgattg
ccagctgatgcgccgactcgaacagaatatttagcgcgggtccagaaattacaggatcaa
ttggcggtggatcagcaaatgtggacggccatagagcagcaataccagactgcccaacag
acggttcttgtggcccaagatcgactggcgacagcaactaaggaagtcacacaaagtgat
cagcgggtggcaagggcgcaagctgatttggccgcacagctcgctcatccggtcgcgccg
ttagcgacggatacggaagcacaagttgcccgttggttgcctcaggttgcgaccttgcca
gttaaacgagagcaactacaaacctttcaagcccaacaggcccgcctagcaaccctgatt
gaaacgttgtcaaaacgccttcagggacaagccaaaccagatcgtgaagcaacacagtcg
gctttaatcgaagccaaccaggcggtcactaccttacgggagcaagagcgccaattgaaa
aacttattagagcaaaatgagcaagcgacgcagcgattacgggcggtattagaccagcaa
gcaacggcacttcaacaaacccaagagctgacggaattagcaggtgtggtcaatggtgat
ggaccaaatagcaaattgggattagagcgctatgttctacagacatatttgcgtcaaatt
cttaccgttggtaatcagcgattccagcaacttactaacggccggtatcaatttgttatt
gatgaaacacctgctgcgtctaagaaacgctctggattggaaatcaatgtgtatgacgac
catgttggcgaacagcgaagcgtgcatacgttatcggggggtgaaagttttatcgcgtcc
ctagcgttagccttggcgttaggtgaagtcatccagcaaacgacagggagtgtagatgtg
gatgccttgttcattgatgagggctttggttctttagatgaggatgctttaatgacagca
ttggaatcattagaaacgattgagggacgccaccggatgattggcattatcagtcatgtg
agcgaacttcgtgaccaagttgccgatcaactacaagtggttgcgaatggcaacggggaa
agtacgattcgttatcatgcagcggattaa |