Leptospira borgpetersenii L550: LBL_1061
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Entry
LBL_1061 CDS
T00405
Symbol
recJ
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lbl
Leptospira borgpetersenii L550
Pathway
lbl03410
Base excision repair
lbl03430
Mismatch repair
lbl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LBL_1061 (recJ)
03430 Mismatch repair
LBL_1061 (recJ)
03440 Homologous recombination
LBL_1061 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbl03400
]
LBL_1061 (recJ)
DNA repair and recombination proteins [BR:
lbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LBL_1061 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LBL_1061 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LBL_1061 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABJ78585
LinkDB
All DBs
Position
1:complement(1244428..1246365)
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AA seq
645 aa
AA seq
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MPKLSPFSHGPGLQELHPSSGFRQYLSPLQHRFYETHLREKSHPEHLLYHGLRELPSPFL
LPDLEPALELLKEFVRTEKKILLFGDRDCDGVSSTSLLGGFLKKIHRGELILKTSNEEDY
GLCPAALEFVKKNKPDLLITLDFGTTNHVQINELASLGIKVIVLDHHEIPEQIPDCYLVS
PKRQDSQYPSEKICTSVLALKFIQAYLYSSLEEYKHATWIGDGNSLFSGYLIYRGKLIFQ
GDRQEAESKFSIPIQDKSYTFESPYPEREWFYQEFLKYPAILEQYLQNFDLASIGTVSDM
MPLHGENRIIVKEGCKILFKLHRRETRHREGLFQLLQLMELADKHVTSKDLGWVLGPMIN
SAGRMNRTEVALNLLLEEDPQRAQTGAKELQKLNEERKERTKRNLFKVDGFLKRKKERTE
KSVLFCYEPDFEPGVSGIVATRLVEEYKKPVLFITPDHGHAKGSIRAYGKENVLNLLKKA
ESIFLQFGGHKEAGGFSLDLEKIPELAKTIFEHADNWLEEEQKQTTLEQTPSLISLRPEE
LNPKIFQELSIFEPFGHENPVPLYSIKNAKVYHTKPMTDGKHVRFRILGAPESIQCLIWN
RGKDFLELLSKNESLDLWGSLEESTFRSKTSLQFVVNYFQKSENY
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaactttcccctttttcacacggcccgggcttacaggaattacatccctcctcc
gggttccgtcagtacttgagtcctcttcagcatcgattctacgaaacccatttacgggaa
aaatcccacccggaacatcttctctatcacggactcagagaactcccttccccgttttta
ttaccggacttggaaccggccttggaattactgaaagaattcgttcggaccgaaaaaaag
attcttcttttcggtgatagggactgcgatggagtttcttccacgagtctgctcggtgga
tttttaaaaaagatccatcggggagaattgatcttaaaaacttcgaacgaagaagactac
ggactctgccccgccgccctcgaattcgtgaaaaaaaacaaacctgatcttttgatcact
ttggacttcggaaccacaaatcacgttcaaattaacgagctcgcctctctgggaatcaag
gtaatcgttctcgatcatcacgagattccggaacaaattcccgattgttatctcgtttct
ccaaaaagacaagactcccaatatccgagcgaaaaaatctgcacgtcggttcttgccctc
aaattcatacaagcttatctctactcctccttggaagaatacaaacacgcgacctggatt
ggagacggaaattccctattttcaggatatctaatataccgaggaaaacttatctttcaa
ggagacagacaggaagcggaatccaaattttccattccgattcaggataaaagttatacc
ttcgaatccccttatccggaaagggaatggttctatcaggaatttttaaaatacccggcg
atcttagaacagtatcttcagaacttcgatttggcttcgatcggaaccgtttccgacatg
atgcccctccacggcgaaaatagaattatcgtaaaagaaggttgcaagattctgttcaag
ctccatcgcagggaaaccagacatagagaagggctctttcaactccttcagctgatggaa
ctcgcggataaacatgtgacttccaaggatttaggttgggtactcgggcccatgatcaat
tccgctggaagaatgaatcgcacagaagtcgcattaaatctattattggaagaagatcca
caacgcgctcagaccggcgctaaagaacttcaaaagctcaacgaggaaagaaaagaaaga
accaagagaaacttattcaaggtagacggttttttaaagcgaaaaaaggaaagaaccgaa
aaatcggtcctcttctgttacgaaccggatttcgaaccgggcgtttcgggtatcgtagcc
acaagactggtggaagaatacaaaaaaccggttttattcatcactccggatcacggacac
gcaaaaggaagtattcgtgcttacggaaaagaaaacgttttgaatcttctcaaaaaagcg
gaatctatttttctacaattcgggggacacaaggaagcaggcggattttctctcgatctc
gaaaaaattccagaacttgcaaaaacgatttttgaacacgcagacaactggctcgaagaa
gaacaaaaacaaacgactctcgaacaaacgccaagtctcatttcgttacgaccggaagaa
ttgaatcccaaaatctttcaggaactttccatcttcgaaccgtttggtcacgagaatcca
gtcccattgtattcgattaaaaacgcgaaggtttaccatacaaaaccgatgacggacggc
aaacacgtccgttttagaatcttaggtgctcccgaatcgattcagtgtttgatttggaac
cggggaaaagattttttagaactactcagcaagaacgaaagtttggacctttggggctct
ttggaagagtccacctttcgatccaaaacttctcttcaatttgtagtaaattactttcaa
aaatcggaaaattactaa
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