Leptospira borgpetersenii L550: LBL_2780
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Entry
LBL_2780 CDS
T00405
Symbol
recQ-1
Name
(GenBank) DNA helicase, Superfamily II
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lbl
Leptospira borgpetersenii L550
Pathway
lbl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LBL_2780 (recQ-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbl03019
]
LBL_2780 (recQ-1)
03400 DNA repair and recombination proteins [BR:
lbl03400
]
LBL_2780 (recQ-1)
Enzymes [BR:
lbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LBL_2780 (recQ-1)
Messenger RNA biogenesis [BR:
lbl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LBL_2780 (recQ-1)
DNA repair and recombination proteins [BR:
lbl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LBL_2780 (recQ-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
RQC
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABJ80119
LinkDB
All DBs
Position
1:3298569..3300434
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AA seq
621 aa
AA seq
DB search
MNSEQNNHIQNLESSLKEIWGMSRFRIGQKESIESVLGGKDTLVILPTGGGKSLIYQLPA
VLDRSSLTLVISPLIALMKDQVDSLKAKGIAAEYCNSTQDDLEQLRILSRASTGKIRILY
LSPEKALSRQIFEILPKLPLCRIAVDEAHCVSQWGHDFRPEYRKLYELRDKYHHQIPIVA
LTATATPRVIQDIFNSLGLKNPTLIKGSFYRENLNFSVRFPQNETSKENELLKLLIRGNF
QKTESGKAIIYCATRQKVESIYNFLKKNGFKVGKYHAGRTDSSREKTQNGYNIGKTNVLV
ATNAFGMGLDNPDVRLIVHYQIPASLESYYQEAGRAGRDGKSSNCILFYHPSDLVTQNFI
IGKENNRKGGETLLSFVKEYAISNRCRHQILCSYFGEEIEPCKTCDVCSEKEPSNSSGRN
QFLEREKIKKQKQEEREKYDFSKNELGVIEQVLEQVPGKFGKRMIVGVLRGSRSNEILRK
KLDRLIGYGSLHSIPEEAILKTLDEWIAEKKVKIVGNKYPKLILSSTVIVKTPRKKKESD
IDQEKKTLSAKNVIQELKNFRDREARRRKWKKFMVLQNPVIVQIAKMMPTTPEELSLVKG
MGSAKVEKFGNDILKILEKWK
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggaacaaaacaatcatattcaaaatttagaatcctctcttaaggaaatctgg
ggaatgtcccgatttcggatcggtcaaaaggagtcgatcgaatccgttttgggtggaaag
gatacattagttattcttcctaccggaggtggaaaatcgctcatctatcagcttcctgcg
gttttagaccgatcttctttgacgcttgtaatttctcctttaatcgcactgatgaaagat
caagtagattctctcaaagcgaagggaatcgccgcggaatactgcaattccactcaggac
gatctggaacaacttagaatcctaagtagagcaagcacgggtaaaattcgaattttatat
ctatcaccggaaaaagctttgagcagacagatattcgaaattctcccgaaacttcctctg
tgtaggatcgccgtcgacgaagcacactgcgtatcccaatggggacacgattttagaccg
gaatatcgaaaactctacgaactcagggataaatatcatcatcagatacctatcgtcgcg
ttaaccgccactgcgactcccagagtcatccaagacatatttaactctctcgggcttaaa
aaccctaccttgatcaaaggtagtttttacagagagaatcttaacttttccgtacgattc
cctcaaaatgagacttctaaggaaaacgaacttttaaaacttttaatccgaggaaatttt
caaaaaaccgaaagcgggaaggcgattatttactgcgcaacccgacaaaaagtggagtca
atttacaattttttaaaaaagaacggatttaaagtcggtaagtatcacgcgggcagaacc
gactcaagccgggaaaaaactcaaaacgggtataatatcggaaaaacgaacgtacttgta
gcgactaacgcgttcggtatgggtttggacaacccggacgttcgtttgatcgtccattat
caaatccccgcgtctttggaaagttattaccaagaagctggaagagccggaagggacgga
aagtcttcgaactgtatccttttctaccatccctccgatctggtaactcagaatttcatc
atcggaaaagaaaataatcggaaaggaggagaaacattactctcctttgtaaaagaatac
gcgatctcaaaccgatgcagacatcaaattctttgttcttacttcggcgaagaaatagaa
ccttgcaaaacctgcgacgtctgctcggaaaaagaaccttcgaactccagcggaagaaat
caattcctcgaaagagaaaagatcaaaaaacaaaaacaagaagaaagggaaaaatacgat
ttttccaaaaatgaattgggagtaatagaacaggttttagaacaggtccccggtaaattc
ggtaaaaggatgatcgtcggtgttttacgaggttccagatcaaatgaaatcttgagaaaa
aaattagatcgtttaatcggatacggttctttgcactcgatcccggaggaagcgatttta
aaaactttggacgaatggattgcagaaaaaaaagtaaaaatcgtaggaaacaaatatccg
aaacttattctttcatcaaccgtaatcgttaaaactccgagaaagaaaaaagaatcggat
atcgaccaagaaaagaaaaccctttccgcaaaaaacgttatccaagaattgaaaaacttt
cgcgatagagaagctagaagaaggaaatggaagaaatttatggtgcttcaaaatccagtg
atcgttcaaatcgcaaaaatgatgcccacaactccggaagagttatccctcgttaaaggg
atgggctccgctaaagtcgagaaattcgggaatgatattttgaaaatcctagaaaagtgg
aaatga
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