Bombilactobacillus bombi: DS830_00665
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Entry
DS830_00665 CDS
T06522
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lbm
Bombilactobacillus bombi
Pathway
lbm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lbm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DS830_00665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbm03021
]
DS830_00665
03400 DNA repair and recombination proteins [BR:
lbm03400
]
DS830_00665
Enzymes [BR:
lbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DS830_00665
Transcription machinery [BR:
lbm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DS830_00665
DNA repair and recombination proteins [BR:
lbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DS830_00665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AXX64107
UniProt:
A0A347SPZ8
LinkDB
All DBs
Position
133601..134536
Genome browser
AA seq
311 aa
AA seq
DB search
MIEFEKPVITKIDESDNYGKYVIEPLERGYGTTLGNSLRRVLLSSLPGTAVSDIQIDGVL
HEFSTIDGVLEDVTEIVLNVKKLSLKLHTDKKIVEINVDGPKQVTAADIETDADLEILDP
DQYICSVADGGHFHMQMTVKTGRGYTPAEQNKNDDTPIGVLPVDSIFTPVSRVNYQVEHT
RVGKRNDFDKLTLDVWTNGSIDPREAISLAAKVLTEHLTIFVELTDEAKNADMMIEKEET
RKEKKLEMTIEELDLSVRSYNCLKRAGINTVQELTDKTESDMMKVRNLGRKSLEEVKEKL
DKLGLSLRQDD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgattgaattcgaaaaaccggttatcacaaaaattgatgaatcagataattatggcaag
tatgtcatcgaaccactcgaacgtggttatggcaccactttaggcaattcattacgccgc
gttttgttatcatctcttccaggaacagcagtttctgatattcagattgatggtgtttta
catgaattttcaactattgacggtgtcttagaagatgtaactgaaattgttttaaatgtt
aagaaactttcattaaagttacacacagataaaaaaatagttgaaattaatgttgatggt
cctaagcaagttactgccgcagatattgaaacagatgctgatttagaaattctagatcct
gatcagtatatttgttctgttgcagatggtggtcattttcatatgcaaatgactgttaaa
actggtcgtggctatacacctgcagaacaaaacaaaaatgatgataccccaattggtgtt
ttacctgtagattcaatttttacccccgtttctcgtgtcaactatcaagttgaacatact
cgagtagggaaacgtaacgatttcgataaattaactctggacgtttggaccaatggctca
attgacccacgtgaagcaattagtttagcggcaaaagttttgactgagcatttaactatt
tttgttgagttaactgatgaagctaaaaatgcggatatgatgatcgaaaaagaagaaact
cgcaaagagaagaagcttgagatgaccatcgaggaactagatttatctgtacgttcatat
aattgtttgaagcgggctggtattaatacagttcaagaattaactgataaaactgaatca
gatatgatgaaagtgagaaacctcggacgtaagtcgttagaagaagtcaaagaaaaatta
gacaaactaggtctttcactacgtcaagatgattaa
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