Bombilactobacillus bombi: DS830_00905
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Entry
DS830_00905 CDS
T06522
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lbm
Bombilactobacillus bombi
Pathway
lbm03030
DNA replication
lbm03430
Mismatch repair
lbm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DS830_00905
03430 Mismatch repair
DS830_00905
03440 Homologous recombination
DS830_00905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbm03032
]
DS830_00905
03400 DNA repair and recombination proteins [BR:
lbm03400
]
DS830_00905
Enzymes [BR:
lbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DS830_00905
DNA replication proteins [BR:
lbm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DS830_00905
DNA repair and recombination proteins [BR:
lbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DS830_00905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_5
AAA_19
AAA_22
TIP49
AAA_24
AAA_2
Csm1_N
AAA_14
Mg_chelatase
Sigma54_activ_2
Sigma54_activat
AAA_assoc_2
AAA_16
TolA_bind_tri
AAA_7
DnaX_C
AAA_18
AAA_28
DNA_pol3_delta_C
PIF1
B12-binding_2
Motif
Other DBs
NCBI-ProteinID:
AXX64149
LinkDB
All DBs
Position
177287..178987
Genome browser
AA seq
566 aa
AA seq
DB search
MAYQALYRVWRPQTFGDVVGQEAITTTLRNAVATKQVSHAYLFTGPRGTGKTSCSKILAK
AVNCLNPQNGEPCNQCEICQAITEGSLNDVIEIDAASNNGVEQIRDIRDKVKYAPTRAEY
KVYIIDEVHMLSTGAFNALLKTLEEPPAKVIFILATTEPQKIPATIISRTQRFDFRRIEA
SDILKRLEYILQDKDLSYDEEGLRLIAQAAEGGMRDALSILDQALSLNNDQLTLNNALQV
TGALDKQQLEDYLQAVIKHDAAQALDNLHQLLTSGRSAMRLTDSIIEVCRDLLLVKTDEQ
LLDEFDRSLVATTVLEAKDQFSQDQLYKMIDAASKTQQDLHNATHATIYLEVLTVKLCEI
MSRQPVAANTVDNSQLQSMQQEIDSLKAQLQKVNNNIQSKTATKKQTTPVKHQKPGTKKI
HVDQQKINQILANATRQDLNQVREIWPDLMSMLNVTQKAVMKVSKPVAASNEGIVVAFDY
AMWFERVMSNQEMLDMLKDNIDKLLKNDADVVIVAAEDWPQIRQNFLQNHNITAQHSEAK
PASTQNPAVAEAKKLFDPDLIELKDD
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaagctctttaccgtgtatggcggccgcagacttttggtgatgttgtcggt
caagaagcaattacaactactttacgtaatgctgtggcaactaagcaagtaagtcacgct
tatttatttactggtccgcgaggtactggaaaaacttcttgttccaaaattttagctaaa
gctgtgaattgtttaaatccgcaaaatggtgagccttgtaatcaatgtgaaatttgtcag
gcaattactgaaggtagtttaaatgatgtaattgaaattgatgctgcttctaacaatgga
gttgaacaaattcgtgatattcgtgataaagtgaagtatgcaccaacccgtgctgaatat
aaagtttatattattgatgaagttcatatgctttcgacgggtgcttttaatgctttgttg
aagacgttagaagaaccgccagctaaagtgatatttattttagcaactacagaaccgcaa
aaaattccggcaactattatttcccgaacacaacggtttgactttcgaagaattgaagcc
agcgatattttgaagcggcttgagtatattctgcaagataaagacctttcttatgatgaa
gagggattgcgcttaattgctcaagctgccgaaggtggaatgcgggatgcgttaagtatt
ttagatcaagcactatcgctaaataatgatcagctcactttaaataatgccttgcaagta
actggagcattggataaacaacaacttgaagactatttacaagcagttatcaagcatgat
gctgctcaagctttagacaatttacatcagttattgactagtggacgttccgccatgcga
ctgacggattcgattattgaagtatgtcgcgatttattgcttgttaaaactgatgaacag
cttctggatgaatttgatcgttcgttagtggcaactactgttttggaggctaaagatcaa
tttagtcaagaccaattatataaaatgattgatgccgcctctaaaacgcagcaagattta
cacaatgcaacccatgccacgatttatttagaagtattaactgttaaactttgtgaaatt
atgtcaaggcaaccagtagctgcgaatactgttgataatagtcaattgcaatctatgcaa
caagaaattgattctcttaaggcacaattgcaaaaggttaataacaatatacaatctaaa
acagcaaccaaaaaacaaacaacaccggttaaacatcaaaaacctggtactaaaaaaatt
catgttgatcaacaaaaaattaatcaaattttagctaatgcaacccgccaagacttaaat
caagtccgtgagatttggccagatctgatgagtatgcttaatgtcactcaaaaagcagtt
atgaaagtttccaaaccagtagctgccagtaatgagggtatcgtagtagcttttgattat
gcgatgtggtttgagcgggtaatgagcaaccaagaaatgttggatatgttgaaagataac
atagacaagttgcttaaaaatgatgctgatgttgtgattgttgctgcggaagattggccg
caaattcggcaaaactttttacaaaatcataatattactgctcaacattcggaagcaaaa
cctgcttcaacacaaaatcctgcagtagcagaagcaaaaaagttatttgatccagatttg
atagaattgaaagatgattaa
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