Bombilactobacillus bombi: DS830_01820
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Entry
DS830_01820 CDS
T06522
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lbm
Bombilactobacillus bombi
Pathway
lbm03030
DNA replication
lbm03410
Base excision repair
lbm03420
Nucleotide excision repair
lbm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DS830_01820 (polA)
03410 Base excision repair
DS830_01820 (polA)
03420 Nucleotide excision repair
DS830_01820 (polA)
03440 Homologous recombination
DS830_01820 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbm03032
]
DS830_01820 (polA)
03400 DNA repair and recombination proteins [BR:
lbm03400
]
DS830_01820 (polA)
Enzymes [BR:
lbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DS830_01820 (polA)
DNA replication proteins [BR:
lbm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DS830_01820 (polA)
DNA repair and recombination proteins [BR:
lbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DS830_01820 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DS830_01820 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
NYN_YacP
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AXX64276
LinkDB
All DBs
Position
344654..347311
Genome browser
AA seq
885 aa
AA seq
DB search
MESKKLVLVDGNSIAFRAFYAMYTVLEKFKSPDGLHTNAIYAFNNMLDLILSKSHPTDML
VAFDAGKVTFRNQLYDDYKGNRLKTPDEFREQLPFIKQLLAARGIKTYELENYEADDIIG
TIATRANKENYQTVIVTGDRDLTQLVNDNTTVAVTIKGVTDLEFYTPQHFQEKLGITPQQ
LIDLKGLMGDNSDNYPGVTKVGEKTALKLLKQYGSMENLYDHVEDMKASKLKEHLIQDRE
QAFLSKKLATIKTDAPIDLQISELTYEGIQTEPLKQFYQKMNFQSFLKKMTTGEEDTAAT
AEDNIKYIELNADTVNQLVSSKQPAVVVVEMVHDNYHTAPIIGLACGNDQGIFVSDNLDI
LQDRSLKNWLSNAQINKSVFDFKRTYVALNRQQISLAGVDFDALLASYLLDVNENSNDLG
QLAQAYGYQNLTPDNQFYGTGAKLSIPPHSELLQHLAAKVDAIQFLQSKLPLQLQEHDQD
QLFDDIELPLSKVLAEMEIAGITVSRTTLEQMEQDLDQRLRDLETTIYQYAGHEFNINSP
QQLSTVLFEELGLKPIKKNKRGYSTSVDVLEKLQGQSPIIAEILNYRQVAKIQSTYVLGL
MNSIAPDQKVHTRYQQTLTQTGRLSSVDPNLQNIPARDEGREIRKAFVPRHADWEIFSSD
YSQIELRVLAHISGDQNMQQAFAENYDIHAHTAMRIFGLDNIDQVTPDMRRQAKATNFGI
VYGISDYGLSQNIGISRKQAAEFIAAYFEQYPDVKNYMDQTVQKAREEGYVETIMHRRRY
LPDIHSRNYHIRSFAERTAMNTPIQGSAADIIKIAMIDMQQKLKDEHLQATMLLQVHDEL
IFEAPKAEIPILEQLVPKIMDSAVKLDVPLKVESAHGPNWFDAKG
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaaaaaattagttttagttgatggcaatagtattgcttttcgtgctttttat
gccatgtatactgttttagaaaaatttaaaagtccagatggtttgcataccaatgcgatt
tatgcttttaataatatgttggatttaattttgtccaaaagtcacccaaccgatatgtta
gttgcttttgatgcaggtaaagtcacttttcgcaaccaactatatgatgattataagggc
aatcgcttaaagacgcctgacgaatttcgcgaacaattaccatttattaaacaattatta
gcagctcgaggcatcaaaacttatgaattagagaattatgaagctgatgatattattggg
acaattgctacacgtgctaataaagaaaattatcaaactgtcatcgtcacgggtgatcgc
gatttaacccagttggtaaatgataatactacggttgccgtaactattaagggtgtcaca
gatttagaattttatactcctcagcattttcaagaaaagttaggaataactcctcagcaa
ttaattgatttaaagggtttaatgggtgataactccgataattatcctggtgttactaaa
gtaggcgaaaaaacagctttaaaattattaaaacaatatggttctatggaaaacttatat
gatcatgttgaagatatgaaagccagcaaattaaaggaacacctcattcaagatcgtgaa
caagcattcttatccaaaaaattagcgactattaaaactgatgcacccattgatttgcaa
atttcagaattaacttatgaaggtattcaaactgaacctttaaagcagttctaccaaaaa
atgaacttccaatcatttctgaaaaaaatgactactggcgaagaagatactgcagcaact
gctgaagataatattaaatatattgaattaaatgctgatacagttaaccagttggtatct
tccaaacaaccagcggttgtagtagtggaaatggtccatgacaattatcatacagcacct
attatcggattagcttgtggtaatgatcaagggatttttgtcagtgataatttagatatt
ttacaagatagatcattaaaaaattggttaagtaatgctcaaatcaataagtcagtcttt
gactttaaacgtacgtatgttgccttaaatcggcagcaaatctcactggcgggggttgat
tttgatgctttgttggcatcttatctcctagatgttaatgaaaattccaatgatttgggt
caattagcgcaagcatatggttatcaaaatttaacaccggataatcaattttatggtact
ggtgccaagttaagcatcccaccacattctgaattattgcaacatttggcggccaaggtg
gatgcgattcaatttttacaaagtaagttacctttacaattacaagagcatgaccaagat
caattatttgatgatattgaattgccgttatccaaagttttagctgagatggaaattgct
ggaattactgtcagtcgcacaactttagaacaaatggaacaagacttagatcaacgtttg
cgagatttagaaacaactatttatcaatatgcagggcatgaatttaatatcaactcgcct
cagcagttaagtaccgttttgtttgaagaattaggcttaaaaccaatcaaaaaaaacaaa
cgaggttattctacttctgtagatgtgctcgaaaaattacaaggacaatcaccaattatt
gcagaaattttgaattatcgccaagtagccaaaattcaatcaacctatgtcttaggttta
atgaattctattgcgcctgatcaaaaagtgcatacccgttatcaacaaaccttgactcaa
actggtcggttatcatctgttgatcctaatttacaaaacataccagctcgtgatgaagga
cgggaaatcagaaaagcatttgtaccacgtcatgcagattgggaaattttttccagtgat
tattcgcaaattgaattacgagttttagctcatatttccggtgatcaaaatatgcaacag
gcctttgcagaaaattacgatattcatgcacatacagctatgcgaatttttgggttagat
aacattgatcaagtgactcccgatatgcgacgtcaagccaaagcaacaaacttcggcata
gtctatggaattagcgattatggtttgtcgcaaaatattgggatttcacgtaagcaagcg
gcggaatttattgcagcttattttgaacaatatccagacgtcaaaaactatatggatcaa
actgttcaaaaagcgcgcgaagaaggctatgtagaaacaataatgcatcggcgccgttat
ttgccagatattcattcgcgcaactatcatattcgatcattcgcagaaagaacagctatg
aatactcccatccaaggcagtgctgctgatattattaagattgcaatgattgatatgcaa
caaaagttaaaagatgaacatttacaggcaacaatgcttttgcaagtccatgacgaatta
atctttgaagcaccaaaagcagaaattccaattttagaacaactcgtgcccaagattatg
gattcagcagttaaattagatgtgcctttaaaagtagaatcagctcatggaccaaattgg
tttgatgctaaaggatag
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