Bombilactobacillus bombi: DS830_02170
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Entry
DS830_02170 CDS
T06522
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lbm
Bombilactobacillus bombi
Pathway
lbm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DS830_02170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbm03400
]
DS830_02170
Enzymes [BR:
lbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DS830_02170
DNA repair and recombination proteins [BR:
lbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DS830_02170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
T2SSE
nSTAND3
AAA_19
PhoH
NPHP3_N
DUF6974
SMC_N
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AXX64339
LinkDB
All DBs
Position
405035..407416
Genome browser
AA seq
793 aa
AA seq
DB search
MYAQIIVDVPTQQTNHSFDYLVPSNLENTIQKGMRVAVPFGRSQRLVQGFVVGLSAHSKF
SGQLKAIDHLLDLRPVLNEELLQLSQWMSQQTFGFWISCMQTMLPNVMRAKYQKIAVALT
PQIQNNDFFQGQSAQVIDNSISVNMQKQLFNWQKKQLIDIKYLVKDQAKQLKQWFIQRQD
LDYAQILTELKPQAKKQRKLIQLFIDQPNLQQISLQQLLQKEHFTAATINAVVKKGWLTK
VKQVVWRQPTEPKITPTHDLVLTAQQQNAYQKIINAQNQVVLLQGITGSGKTEIYLQAIK
YFLQQKKTALMLVPEISLTPQMVSQVRGRFGHLVAVLHSGLSSGERYDEWRRIETGAARV
VVGARSAVFAPLNNLGIIIIDEEHEASYKQEDNPRYHARDIALWRGKYHNCPVVLGSATP
SLESRARGQKGVYKLVHLNQRVNQHALPTVEVVDLRMPANLTKQPDLSLPLVQALKVCLQ
RQEQAILLLNRRGFSSFLLCRECGYVPQCPNCDISLTVHLQEHCLMCHYCGHKEAIPTVC
PQCKSKKIRFSGTGTQKVEQQLQTILPTARIIRMDNDTTKHKGAHQQLLERFEQTGDILL
GTQMIAKGLDFPNVTLVGVINADTGLITNDFRSSERTFQLLTQVSGRAGRAQKTGKVYIQ
TYNPQHYAIKLAAQQDYEKFYQQEMQFRHQAGYPPYYYLIKITISHHSQAQAFKMAYNIA
KQVRTVLKKDEQLLGPTEPTIARIKNRYYYQIVIKYRINPNLLKVLHQIVNNVQIDKKRG
FLVAVDNEPQQME
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcacagattatagttgatgtacccacgcaacagactaatcacagttttgattat
ttggtaccttccaatctggaaaatacgattcaaaaagggatgcgcgtagcagttcctttt
ggacgcagtcagcggctggtacaaggatttgtagttggtttaagtgcccacagtaagttt
tctgggcaacttaaagcaattgatcacttactggatttgcgtccagtattaaatgaagaa
ttattacaattgtcgcagtggatgtcgcagcaaacttttggcttttggatttcgtgtatg
cagacgatgctaccaaatgttatgagagccaagtatcaaaaaattgcggtagctttgaca
ccacaaatccaaaataatgatttttttcaaggccaatcagcacaagttatcgataatagt
atatctgtgaatatgcaaaaacaactatttaattggcaaaaaaagcaattaattgacatc
aaatatctagttaaagaccaagccaagcaattaaaacaatggtttattcaacgtcaagac
cttgattatgctcaaatattgacagaactaaagccacaagctaaaaagcaacgcaaatta
attcaattatttattgatcagcctaatttacaacaaattagtttgcagcaattattacaa
aaagaacattttactgctgcaaccattaacgcagtagtaaaaaagggctggttgactaaa
gttaaacaagtagtttggcgccagcccacagaacctaaaattacgcctactcatgattta
gtactgacagctcaacaacagaatgcttaccaaaaaattattaacgcacaaaatcaagta
gtgttattacaagggattactgggagtggcaagactgaaatctatttacaagcaattaaa
tattttttacaacaaaaaaagacagctttaatgctggtacctgagatttcgctaacacca
cagatggtaagtcaagtacgcgggcgttttggacatttggtagcagtgttgcatagtgga
ttatctagcggggaacgctatgatgaatggcgacggattgaaactggggcagcgcgcgtg
gttgttggggcgcgttctgcagtttttgcacctttaaataacttaggaattattattatt
gacgaagaacatgaggctagctataagcaagaagataatccgcgctatcatgcgcgtgat
attgctttatggcgtggaaaatatcataattgtcctgtggttttgggtagtgcaacccct
agtctagaatcacgggctcgtggacaaaagggtgtttacaagttggtacatcttaaccaa
cgagttaaccaacacgcgttaccaacagttgaagttgttgacttaagaatgccagctaac
ttgactaaacaaccggacttatccttgcctttagttcaggcactcaaagtttgcttacaa
cgtcaagaacaggcaattttactcttaaatcgacggggattttcgtcatttttattgtgt
cgtgaatgtggatatgtgccacaatgtcctaattgtgatatttctttaactgtccattta
caagaacattgtttaatgtgccattattgtggacataaagaagccattcccaccgtgtgc
ccgcagtgtaagagtaaaaaaattcgttttagtggtactggaacgcaaaaggtagaacaa
caattacaaactattttgcctacagctcgtataatccggatggacaatgacaccactaag
cataagggagctcatcaacaattattagaacgatttgagcaaacaggtgatattttatta
ggaacgcaaatgatcgcgaaaggacttgactttcctaatgttacgttagtaggagttatt
aatgctgatactggattaataaccaatgattttcgctctagtgagcgtacttttcagtta
ttaacccaagtaagtggccgtgcgggtcgtgctcaaaaaacaggtaaagtttatattcaa
acttataatcctcagcattatgcgattaagttagcagcgcaacaagattatgaaaaattt
taccagcaagaaatgcaatttcgccatcaagctggttacccgccttattattatttaatt
aaaattacaatttcgcatcattcacaagcacaggcttttaagatggcttataatatagct
aaacaagtacgcaccgtcttaaaaaaggatgagcagttattaggtccgacagaaccaacg
attgcacggattaaaaatcgttattattatcaaatagtaattaaatatcggataaatcct
aatttattaaaagttttacatcaaatcgttaataatgttcaaattgataaaaaaagaggt
tttttagttgcagttgataatgaacctcaacaaatggagtga
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