Bombilactobacillus bombi: DS830_02370
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Entry
DS830_02370 CDS
T06522
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lbm
Bombilactobacillus bombi
Pathway
lbm03030
DNA replication
lbm03430
Mismatch repair
lbm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DS830_02370
03430 Mismatch repair
DS830_02370
03440 Homologous recombination
DS830_02370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbm03032
]
DS830_02370
03400 DNA repair and recombination proteins [BR:
lbm03400
]
DS830_02370
Enzymes [BR:
lbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DS830_02370
DNA replication proteins [BR:
lbm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DS830_02370
DNA repair and recombination proteins [BR:
lbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DS830_02370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
DEDDh_C
RNase_H_2
HHH_3
Zn-ribbon_8
T2SSK
DnaA_N
YhfH
Motif
Other DBs
NCBI-ProteinID:
AXX64379
UniProt:
A0A347SQS0
LinkDB
All DBs
Position
445212..449522
Genome browser
AA seq
1436 aa
AA seq
DB search
MTDSKQQVLFQTLLTQLDLPEKIGATALFKTAKIQKVQVHTESQRWTFIFEFERIVPIAD
LQVFSNQLKHSFDNIQDVDFRIITTNSHFDQQLLTAYWPYIIEQTNPNYSVMKELAQQQG
PKLIDNNVVLSVDNDVLRDYLTQKYLNDIEKSYRDLGFAPFRIKVVVDASNTQARVNELR
QKQEQQQQQMAATVAQKKASQPTADSTGSATKVLGKVIDNSISTIPMEEITDEQQSVVVQ
GYVFKAEIRQLKTGRQLLILEATDYTSSFVIKKFSKQNDAHDIFAEFHEGIWLKVRGSVQ
EDNYSHELTINAYDINIIKKIGRQDTAADKRIELHVHTNMSQMDAVSSTKDIVKQAAEWG
QPAIAITDHSTAQAFPDAHSAGEKYGIKIIYGVEVNLVDEGEPIAYNLRDQELSTAEYVI
FDVETTGLSAVYDSIIELAATKMKDGKVVGEFDEFIDPGHPLSATTINLTSITDEMVKGS
NSEAQALEKFQKFVGDDILVGHNVTFDIGFLNAALHRNGQPSVNVPVIDTLEMSRTLHSE
YRNHKLDSLAKRYSIQLEHHHRANSDALTTGYLMYKLLEEMQNRFQTTNVQQLNEHIGGQ
EAYKQARPYHATLLATTQAGLKNLFKIVSISMTEYYYRTPRVPRNILNKYRKGIVVGSAC
SSGEVFTAMMQKGYDEAYQKAQYYDYLEIMPPDIYQPLLDSNMVADEKSLQEILGNIVKL
GEDLDKPVVASGDVHYLEAKDAVYRDIIVKAVKSNPLARQKLPLANFKTTPEMLAAFSWL
GEQQAQKVVVDNTHTVADWVDDDITPVKDRLYTPKMPGAEQEIQDLTYNKAQELYGNPLP
EIVQARLDKELKSIIGNGFAVIYLIAQRLVHKSNKDGYLVGSRGSVGSSLVATMTGITEV
NPLPPHYRCPDCHYTEFFTKGEIGSGYDLPDKSCPQCGASLKKDGQDIPFETFLGFKGDK
VPDIDLNFSGDYQPVAHNYTKVLFGEDHVFRAGTIGTVADRTAYGYVSNYEELTDQKFRG
AEKDRLAAGSTGVKRTTGQHPAGIIVVPDDMDIYDFTPIQYPADDQTAAWKTTHFDFHSI
HDNILKLDILGHDDPTMIRMLQDLSGIDPQTIPTDDPGVMKLFSGTESLGVTPEEIGSKM
GTLGIPEFGTRFVRGMLEETHPTTFAELLQISGLSHGTDVWLGNAEEYIQQGIVTLKDVI
GCRDNIMMDLIHWGMEPQMAFQIMEHVRKGRGIPDEWQDEMRANKNVPDWYIDSCLKIKY
MFPKAHATAYIIMALRIAYFKVHFPIIYYCAYFSVRCDMFDLQAMAQGKNAVEAAMKVIN
EQGMDASTKDKNLLTVLEVANECLARGIKIKMVDIEKSDATNFKIIDEHTLLAPFIAVPS
LGLNVAKQIVAAREEQPFLSKEDLSKRGKVSKTIIDYLTQNKVIDQLPDENQLSLF
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
ttgacggattctaagcaacaagttttatttcaaactcttttaactcagcttgacttaccc
gaaaaaattggtgcaactgcattatttaaaacggctaaaattcaaaaagttcaagtccac
actgagtcccagcgctggacttttatttttgaatttgaaaggattgtaccaattgctgat
ttgcaggtattttccaaccagttaaaacacagttttgataatattcaggatgttgatttt
cgaattattaccactaattcccactttgaccaacaacttttaacagcttattggccatat
attattgaacaaactaatcctaattattcagttatgaaagaattagcccagcaacagggg
cccaagctgattgataataacgtggttttgagtgttgataatgatgtattacgtgactat
ttaactcaaaaatatttgaatgatattgaaaaaagttatcgtgatttgggttttgcgcct
tttcgaattaaagtagtagttgatgcttcaaatactcaagcacgggtaaatgaattacgg
caaaagcaagaacaacagcaacaacaaatggcagccacagtagctcaaaaaaaagctagt
caaccgactgcagatagcactggatcagccactaaagtgttaggaaaagtaattgataat
tcaatttcaacgataccaatggaagaaattactgatgagcaacaatcagtagtcgttcaa
ggttacgtgttcaaggctgaaattcgccaattaaaaaccggtcggcaattgttgatttta
gaagcaactgattatacttcctcatttgttatcaaaaagttttccaaacaaaatgatgcc
catgatatttttgcagaatttcatgaaggtatttggttaaaagtgcgtggctctgtacaa
gaagacaattattctcatgagttaacaattaacgcttatgacataaatattattaaaaag
ataggccgccaagatactgctgctgataaacgaatagaattacatgtgcatactaatatg
agtcagatggatgctgtaagttccactaaggatattgtgaaacaagcagccgaatggggc
caaccagccattgccattacagatcattcgactgcccaagctttccctgatgctcatagt
gctggtgaaaaatatggtatcaaaataatttatggcgttgaggtcaacttagtagatgaa
ggtgagccaattgcctataatttgcgagatcaagaattaagtaccgccgaatatgtaatt
tttgatgttgaaactacgggtttatcagcggtctatgattctattattgaattagccgca
accaaaatgaaagatggcaaagtggttggtgaatttgatgaatttattgacccgggccat
cccttatccgcaactacgattaatttgacttcaattactgatgaaatggtcaaaggaagc
aatagtgaagcccaagctctggaaaaatttcaaaaatttgtgggcgatgatattttagta
gggcataatgttacatttgatattggttttttaaatgcagctttacatcggaatggtcaa
cctagtgttaatgttccggtaattgacaccctagaaatgtcccggactttacattccgaa
tatcgtaatcataagttagatagtttggctaaacgttattctatccaattagagcatcat
caccgcgctaactcggatgcgttaacaactggatatttgatgtacaaattattagaagaa
atgcaaaatcgttttcaaactaccaatgttcaacaattaaatgaacacattggtggccag
gaagcatataagcaagcacgaccttatcacgcaacactactggctacaactcaagctgga
ttgaagaatttatttaaaattgtttctatttcaatgacagaatattattatcgaactccg
cgtgtaccgcgcaatattttgaataaatatcgtaaaggcattgtggtaggctcagcttgt
agttctggtgaagtttttaccgctatgatgcaaaagggatacgatgaagcctaccaaaaa
gcgcagtattatgattatttagaaattatgccacctgatatttatcagcctttattagat
tccaatatggtagctgatgaaaaatcactgcaagaaatcttgggcaatattgtcaaatta
ggtgaagatttagataaaccagttgtagctagtggtgatgttcattatctagaagccaag
gatgctgtttatcgtgatattattgtcaaagcagttaagagcaatcctttagcccgccaa
aaattaccattggctaattttaagacgactcctgaaatgttagctgcttttagttggtta
ggtgaacaacaagctcaaaaagtagtagttgataatacccatacagtagctgactgggtt
gatgatgacattactcctgttaaagatcggctctacacacctaaaatgcctggtgctgaa
caagaaattcaagatttaacttataataaggcacaagaattatatggaaatccattacca
gaaattgtccaagctagattagataaagaattaaaaagtattattgggaatggctttgcg
gtcatttatttaattgcacaacgtttagttcataaaagtaataaagatggttatttggtt
ggttccagaggttctgtcggttcaagtttagtagcaacaatgactggaataactgaagtt
aatccgttaccaccacattatcgctgtcccgattgtcactatacagaattctttacaaaa
ggtgaaattggttcgggctatgatttacctgataaatcctgtccgcaatgcggtgcatca
ctgaaaaaagatggtcaagatataccttttgaaacttttttaggttttaaaggagataaa
gttccagatattgatttaaacttttcaggtgactatcagccagtagctcataattatact
aaggtactgtttggggaagatcatgtttttcgggctggtaccattggtacagtagcagat
cggactgcttatggttatgtgagcaattatgaagaattgactgatcaaaaatttagaggt
gcggaaaaagaccgcctagctgcgggctcaactggagttaagcgaacaactggccaacat
ccagcaggaattattgttgtacccgatgatatggatatttatgactttacacccatccaa
tatcctgcagatgatcaaacggctgcttggaaaacaactcattttgattttcattcaatt
cacgataatattttaaaacttgatattttgggccatgatgatcccacaatgattcggatg
ctccaagatttatcgggtattgatccacaaactattcctactgatgatcctggagtgatg
aaattattctctggaacggaatctttgggtgttacaccagaagaaattggttctaaaatg
gggactttaggtattccagaatttggaacgcgctttgtccggggaatgttagaagaaacg
cacccaaccacttttgctgaattactgcaaatttctggactttcgcatggaacggatgtt
tggttgggcaatgcggaagaatatatccaacaaggcattgtcactttaaaagatgttatt
ggatgtcgagataatatcatgatggacttaattcattggggaatggaaccgcaaatggcc
tttcagattatggaacatgttcgtaaaggtcgcggtattcccgatgaatggcaagatgaa
atgcgtgcaaataaaaatgttcctgattggtatattgattcttgtcttaaaattaaatat
atgtttccaaaagctcacgctaccgcctatattattatggccttgcgaattgcttatttc
aaagttcattttccaattatttattattgtgcttatttttcggtgcgttgtgatatgttt
gatcttcaagcaatggcacaaggaaaaaatgctgtggaagctgcaatgaaagtaattaat
gaacagggaatggatgcaagtactaaagataaaaatctcttgacggtgttagaagtagct
aacgaatgtttagcgcgaggcatcaaaatcaaaatggtagatattgaaaagtcagatgcg
actaattttaaaattattgatgaacatactctactggcaccatttatagctgtgcctagt
ttgggcttaaatgttgccaaacaaatagtcgcagctcgagaagaacagccatttttatcc
aaagaagatttgtctaaaagaggtaaagtttccaaaacaattatcgattatttgacgcaa
aacaaagtaattgatcaattgcctgatgaaaatcaactatccctattttag
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integrated database retrieval system