KEGG   Bombilactobacillus bombi: DS830_02370
Entry
DS830_02370       CDS       T06522                                 
Name
(GenBank) PolC-type DNA polymerase III
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
lbm  Bombilactobacillus bombi
Pathway
lbm03030  DNA replication
lbm03430  Mismatch repair
lbm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lbm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DS830_02370
   03430 Mismatch repair
    DS830_02370
   03440 Homologous recombination
    DS830_02370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbm03032]
    DS830_02370
   03400 DNA repair and recombination proteins [BR:lbm03400]
    DS830_02370
Enzymes [BR:lbm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DS830_02370
DNA replication proteins [BR:lbm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DS830_02370
DNA repair and recombination proteins [BR:lbm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DS830_02370
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NII DNA_pol3_a_NI HHH_6 DEDDh_C RNase_H_2 HHH_3 Zn-ribbon_8 T2SSK DnaA_N YhfH
Other DBs
NCBI-ProteinID: AXX64379
UniProt: A0A347SQS0
LinkDB
Position
445212..449522
AA seq 1436 aa
MTDSKQQVLFQTLLTQLDLPEKIGATALFKTAKIQKVQVHTESQRWTFIFEFERIVPIAD
LQVFSNQLKHSFDNIQDVDFRIITTNSHFDQQLLTAYWPYIIEQTNPNYSVMKELAQQQG
PKLIDNNVVLSVDNDVLRDYLTQKYLNDIEKSYRDLGFAPFRIKVVVDASNTQARVNELR
QKQEQQQQQMAATVAQKKASQPTADSTGSATKVLGKVIDNSISTIPMEEITDEQQSVVVQ
GYVFKAEIRQLKTGRQLLILEATDYTSSFVIKKFSKQNDAHDIFAEFHEGIWLKVRGSVQ
EDNYSHELTINAYDINIIKKIGRQDTAADKRIELHVHTNMSQMDAVSSTKDIVKQAAEWG
QPAIAITDHSTAQAFPDAHSAGEKYGIKIIYGVEVNLVDEGEPIAYNLRDQELSTAEYVI
FDVETTGLSAVYDSIIELAATKMKDGKVVGEFDEFIDPGHPLSATTINLTSITDEMVKGS
NSEAQALEKFQKFVGDDILVGHNVTFDIGFLNAALHRNGQPSVNVPVIDTLEMSRTLHSE
YRNHKLDSLAKRYSIQLEHHHRANSDALTTGYLMYKLLEEMQNRFQTTNVQQLNEHIGGQ
EAYKQARPYHATLLATTQAGLKNLFKIVSISMTEYYYRTPRVPRNILNKYRKGIVVGSAC
SSGEVFTAMMQKGYDEAYQKAQYYDYLEIMPPDIYQPLLDSNMVADEKSLQEILGNIVKL
GEDLDKPVVASGDVHYLEAKDAVYRDIIVKAVKSNPLARQKLPLANFKTTPEMLAAFSWL
GEQQAQKVVVDNTHTVADWVDDDITPVKDRLYTPKMPGAEQEIQDLTYNKAQELYGNPLP
EIVQARLDKELKSIIGNGFAVIYLIAQRLVHKSNKDGYLVGSRGSVGSSLVATMTGITEV
NPLPPHYRCPDCHYTEFFTKGEIGSGYDLPDKSCPQCGASLKKDGQDIPFETFLGFKGDK
VPDIDLNFSGDYQPVAHNYTKVLFGEDHVFRAGTIGTVADRTAYGYVSNYEELTDQKFRG
AEKDRLAAGSTGVKRTTGQHPAGIIVVPDDMDIYDFTPIQYPADDQTAAWKTTHFDFHSI
HDNILKLDILGHDDPTMIRMLQDLSGIDPQTIPTDDPGVMKLFSGTESLGVTPEEIGSKM
GTLGIPEFGTRFVRGMLEETHPTTFAELLQISGLSHGTDVWLGNAEEYIQQGIVTLKDVI
GCRDNIMMDLIHWGMEPQMAFQIMEHVRKGRGIPDEWQDEMRANKNVPDWYIDSCLKIKY
MFPKAHATAYIIMALRIAYFKVHFPIIYYCAYFSVRCDMFDLQAMAQGKNAVEAAMKVIN
EQGMDASTKDKNLLTVLEVANECLARGIKIKMVDIEKSDATNFKIIDEHTLLAPFIAVPS
LGLNVAKQIVAAREEQPFLSKEDLSKRGKVSKTIIDYLTQNKVIDQLPDENQLSLF
NT seq 4311 nt   +upstreamnt  +downstreamnt
ttgacggattctaagcaacaagttttatttcaaactcttttaactcagcttgacttaccc
gaaaaaattggtgcaactgcattatttaaaacggctaaaattcaaaaagttcaagtccac
actgagtcccagcgctggacttttatttttgaatttgaaaggattgtaccaattgctgat
ttgcaggtattttccaaccagttaaaacacagttttgataatattcaggatgttgatttt
cgaattattaccactaattcccactttgaccaacaacttttaacagcttattggccatat
attattgaacaaactaatcctaattattcagttatgaaagaattagcccagcaacagggg
cccaagctgattgataataacgtggttttgagtgttgataatgatgtattacgtgactat
ttaactcaaaaatatttgaatgatattgaaaaaagttatcgtgatttgggttttgcgcct
tttcgaattaaagtagtagttgatgcttcaaatactcaagcacgggtaaatgaattacgg
caaaagcaagaacaacagcaacaacaaatggcagccacagtagctcaaaaaaaagctagt
caaccgactgcagatagcactggatcagccactaaagtgttaggaaaagtaattgataat
tcaatttcaacgataccaatggaagaaattactgatgagcaacaatcagtagtcgttcaa
ggttacgtgttcaaggctgaaattcgccaattaaaaaccggtcggcaattgttgatttta
gaagcaactgattatacttcctcatttgttatcaaaaagttttccaaacaaaatgatgcc
catgatatttttgcagaatttcatgaaggtatttggttaaaagtgcgtggctctgtacaa
gaagacaattattctcatgagttaacaattaacgcttatgacataaatattattaaaaag
ataggccgccaagatactgctgctgataaacgaatagaattacatgtgcatactaatatg
agtcagatggatgctgtaagttccactaaggatattgtgaaacaagcagccgaatggggc
caaccagccattgccattacagatcattcgactgcccaagctttccctgatgctcatagt
gctggtgaaaaatatggtatcaaaataatttatggcgttgaggtcaacttagtagatgaa
ggtgagccaattgcctataatttgcgagatcaagaattaagtaccgccgaatatgtaatt
tttgatgttgaaactacgggtttatcagcggtctatgattctattattgaattagccgca
accaaaatgaaagatggcaaagtggttggtgaatttgatgaatttattgacccgggccat
cccttatccgcaactacgattaatttgacttcaattactgatgaaatggtcaaaggaagc
aatagtgaagcccaagctctggaaaaatttcaaaaatttgtgggcgatgatattttagta
gggcataatgttacatttgatattggttttttaaatgcagctttacatcggaatggtcaa
cctagtgttaatgttccggtaattgacaccctagaaatgtcccggactttacattccgaa
tatcgtaatcataagttagatagtttggctaaacgttattctatccaattagagcatcat
caccgcgctaactcggatgcgttaacaactggatatttgatgtacaaattattagaagaa
atgcaaaatcgttttcaaactaccaatgttcaacaattaaatgaacacattggtggccag
gaagcatataagcaagcacgaccttatcacgcaacactactggctacaactcaagctgga
ttgaagaatttatttaaaattgtttctatttcaatgacagaatattattatcgaactccg
cgtgtaccgcgcaatattttgaataaatatcgtaaaggcattgtggtaggctcagcttgt
agttctggtgaagtttttaccgctatgatgcaaaagggatacgatgaagcctaccaaaaa
gcgcagtattatgattatttagaaattatgccacctgatatttatcagcctttattagat
tccaatatggtagctgatgaaaaatcactgcaagaaatcttgggcaatattgtcaaatta
ggtgaagatttagataaaccagttgtagctagtggtgatgttcattatctagaagccaag
gatgctgtttatcgtgatattattgtcaaagcagttaagagcaatcctttagcccgccaa
aaattaccattggctaattttaagacgactcctgaaatgttagctgcttttagttggtta
ggtgaacaacaagctcaaaaagtagtagttgataatacccatacagtagctgactgggtt
gatgatgacattactcctgttaaagatcggctctacacacctaaaatgcctggtgctgaa
caagaaattcaagatttaacttataataaggcacaagaattatatggaaatccattacca
gaaattgtccaagctagattagataaagaattaaaaagtattattgggaatggctttgcg
gtcatttatttaattgcacaacgtttagttcataaaagtaataaagatggttatttggtt
ggttccagaggttctgtcggttcaagtttagtagcaacaatgactggaataactgaagtt
aatccgttaccaccacattatcgctgtcccgattgtcactatacagaattctttacaaaa
ggtgaaattggttcgggctatgatttacctgataaatcctgtccgcaatgcggtgcatca
ctgaaaaaagatggtcaagatataccttttgaaacttttttaggttttaaaggagataaa
gttccagatattgatttaaacttttcaggtgactatcagccagtagctcataattatact
aaggtactgtttggggaagatcatgtttttcgggctggtaccattggtacagtagcagat
cggactgcttatggttatgtgagcaattatgaagaattgactgatcaaaaatttagaggt
gcggaaaaagaccgcctagctgcgggctcaactggagttaagcgaacaactggccaacat
ccagcaggaattattgttgtacccgatgatatggatatttatgactttacacccatccaa
tatcctgcagatgatcaaacggctgcttggaaaacaactcattttgattttcattcaatt
cacgataatattttaaaacttgatattttgggccatgatgatcccacaatgattcggatg
ctccaagatttatcgggtattgatccacaaactattcctactgatgatcctggagtgatg
aaattattctctggaacggaatctttgggtgttacaccagaagaaattggttctaaaatg
gggactttaggtattccagaatttggaacgcgctttgtccggggaatgttagaagaaacg
cacccaaccacttttgctgaattactgcaaatttctggactttcgcatggaacggatgtt
tggttgggcaatgcggaagaatatatccaacaaggcattgtcactttaaaagatgttatt
ggatgtcgagataatatcatgatggacttaattcattggggaatggaaccgcaaatggcc
tttcagattatggaacatgttcgtaaaggtcgcggtattcccgatgaatggcaagatgaa
atgcgtgcaaataaaaatgttcctgattggtatattgattcttgtcttaaaattaaatat
atgtttccaaaagctcacgctaccgcctatattattatggccttgcgaattgcttatttc
aaagttcattttccaattatttattattgtgcttatttttcggtgcgttgtgatatgttt
gatcttcaagcaatggcacaaggaaaaaatgctgtggaagctgcaatgaaagtaattaat
gaacagggaatggatgcaagtactaaagataaaaatctcttgacggtgttagaagtagct
aacgaatgtttagcgcgaggcatcaaaatcaaaatggtagatattgaaaagtcagatgcg
actaattttaaaattattgatgaacatactctactggcaccatttatagctgtgcctagt
ttgggcttaaatgttgccaaacaaatagtcgcagctcgagaagaacagccatttttatcc
aaagaagatttgtctaaaagaggtaaagtttccaaaacaattatcgattatttgacgcaa
aacaaagtaattgatcaattgcctgatgaaaatcaactatccctattttag

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