Bombilactobacillus bombi: DS830_03390
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Entry
DS830_03390 CDS
T06522
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lbm
Bombilactobacillus bombi
Brite
KEGG Orthology (KO) [BR:
lbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbm03032
]
DS830_03390
03400 DNA repair and recombination proteins [BR:
lbm03400
]
DS830_03390
Enzymes [BR:
lbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DS830_03390
DNA replication proteins [BR:
lbm03032
]
Prokaryotic type
DNA Topoisomerases
DS830_03390
DNA repair and recombination proteins [BR:
lbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DS830_03390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
HypA
Motif
Other DBs
NCBI-ProteinID:
AXX64565
LinkDB
All DBs
Position
complement(651961..654072)
Genome browser
AA seq
703 aa
AA seq
DB search
MVSSKATKRKPTTKNLVIVESPAKAKTIEKYLGKNYKVLASKGHIRDLPKSRMGVDIDHN
YEPTYISIRGKGDTIKELKKAAKNSQNVYLAADPDREGEAIAWHVSYVLGLDLDDKNRVV
FNEITKDAVKEAFKHPRNVNMDLVNAQQARRILDRLVGYSISPILWQKVKKGLSAGRVQS
IALKLVIEREKSIQKFQPKEYWTILSHFQAGTAKKNIFEANFYGVDGKKKELPSNQAVKD
ILAQIDKRKKFNVSKVVKKERKRYPAAPFTTSSLQQEANRKLNFKTRKTMMLAQQLYEGI
NLGGRQGSVGLITYMRTDSTRIATVAKHETAKFIQEEYGEQYAATKLHKTKNPEGAQDAH
EAIRPTSVLRTPQSLKKVLTRDQYRLYNLIWNRFVASEMTPAVMDTVKVVLEQSKVQFQA
NGSQIKFDGFLKLYKDDNKTKDNLLPDLSEGQQVKLLDTNPEQHFTQPPARYTEASLVKA
LEENGVGRPSTYAPTIDTIQRRYYVKLNGRSFEPTELGEIVDNLIEKYFPDIVNIDFTAQ
LEDELDGIEAGKEKWTKVVDEYYQPFSKELKNADEKIEKLQIKDEPAGFDCDICGAPMVI
KLGRYGKFFACSRFPDCRNTKPIIKEIGVVCPKCHQGQVVERKSKKRRIFYGCSRYPDCD
FVDWNKPINRDCPKDGHYLVEKKVKGGRQVVCPNGDYEEEVQK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
ttggtaagctcaaaagcaacaaaacgtaaacccaccactaaaaatttagtgattgtggaa
tcaccagcaaaagctaagacaattgaaaaatatttaggaaaaaattataaagttttagcc
agcaaaggacacattcgagatttgccaaagagtcgaatgggagttgatattgatcacaat
tacgagccaacttatatttctattcgcggcaaaggcgacacgattaaagaattgaaaaaa
gctgcgaaaaattcgcaaaatgtttatctggcagccgatcctgatcgtgaaggcgaagcg
attgcttggcatgtttcttatgttttgggattagatcttgacgataaaaatcgagttgtc
tttaatgaaattactaaagatgctgtcaaagaagcatttaaacatccccgtaatgttaat
atggatttggtgaatgcccaacaagcacgaagaattttagatcggttagtcggttattca
attagtccgattctatggcaaaaagtaaaaaagggcttgagtgcaggtcgtgtgcagtct
attgccttgaaattagtcattgaacgggaaaaatctattcaaaaatttcagccgaaagag
tattggacgattttaagtcattttcaagctggaacagccaagaaaaatatttttgaagct
aatttttatggtgttgatggcaagaaaaaagaattaccgtcaaaccaagcagttaaagat
attttggcacagattgataaacgaaaaaaatttaatgtctctaaagttgttaaaaaagag
cggaaacgttatccagcagctccgtttacaactagctccttacaacaagaagctaatcga
aaattaaactttaaaacgcggaaaaccatgatgttagcgcaacagctgtatgaaggtatt
aatttaggcgggcgtcaaggcagtgtcggtttaattacctatatgcggactgattctacg
cggattgccactgttgctaaacatgaaactgccaaattcattcaagaagaatacggtgaa
caatatgcagcaactaaattgcataaaaccaaaaatcctgaaggagctcaagacgctcat
gaagcgattcgcccgacttcagtcttacgaacaccgcaatctcttaaaaaagttttaaca
agagatcaatatcgcctttataacttgatttggaatcggtttgttgctagtgaaatgaca
ccagctgttatggataccgtgaaggtagtattagaacaaagcaaagtccaatttcaagcc
aatggatcacaaattaagtttgatggttttttaaagttatataaagacgataataaaact
aaagataatcttttaccagatttaagtgaaggtcaacaagttaaattattagataccaat
ccagaacaacattttacacagccaccagctagatatactgaagcttctttggtcaaggcc
ctggaagaaaacggtgttggtcgtccttccacgtatgcgccaacaattgatactatccag
cgtcgttattatgtcaaattaaatggccgtagctttgaaccaactgaactaggtgaaatt
gtagataatttaattgaaaaatattttccagatattgtgaatattgattttactgcccag
ttagaagatgaattagatggtatagaagcaggtaaagaaaaatggactaaagttgtagat
gagtattatcagcctttttctaaagaattaaaaaatgccgatgaaaaaattgaaaaatta
caaattaaagatgaacctgcaggatttgattgtgatatttgtggagcgcccatggttatt
aagttgggacgctatgggaaattttttgcttgcagtcgttttccggactgtcgcaataca
aaaccaatcatcaaagaaattggggtagtttgtccgaaatgtcatcagggtcaagtagtg
gaacgtaaatctaaaaagcgtcgaattttttatgggtgttcccgttatccggattgtgat
tttgttgattggaataagcctattaaccgtgattgtcctaaggatggacattatttagtt
gagaaaaaagttaagggtggtcgtcaagtagtttgtcctaatggcgattatgaagaagaa
gttcagaaataa
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