Bombilactobacillus bombi: DS830_03530
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Entry
DS830_03530 CDS
T06522
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lbm
Bombilactobacillus bombi
Pathway
lbm03030
DNA replication
lbm03430
Mismatch repair
lbm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DS830_03530
03430 Mismatch repair
DS830_03530
03440 Homologous recombination
DS830_03530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbm03032
]
DS830_03530
03400 DNA repair and recombination proteins [BR:
lbm03400
]
DS830_03530
Enzymes [BR:
lbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DS830_03530
DNA replication proteins [BR:
lbm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DS830_03530
DNA repair and recombination proteins [BR:
lbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DS830_03530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AXX64591
LinkDB
All DBs
Position
complement(678590..681892)
Genome browser
AA seq
1100 aa
AA seq
DB search
MVAQLQVLSSYTLLQSTISLNNLMKQAKHLGYKHLALTDINVTYGLVEFYKLAQKYQIHP
ILGITIQVNGLIDTNEKYPLIVLAKNNHGYHNLLKLSTWIMTQEDPLLITTKSELLNDLI
MIVPANKSELSALLANNSQQVTEYLAALKQIMQQDLYLGISLRNNLQDQAQLINRLAKLH
QIPCVALDDVQYLQPEDAFSNEVLHHIASGEKITQFIRQGDNYLRSKNDFVADFQSKNLQ
TALDNTQIIAQQCQVQIPFQRTLLPQFSTPKKVSSIAYLRNLVQAGLHNILGPSISATYQ
KRAQHELNVIEKMGYADYFLIVWDAINQAHKMNIMTGPGRGSAAGSLVSYALGITQVDPI
QYGLLFERFLNPERVDMPDIDLDIPDNRRDELVQYMQHKYGDDHMAQIITFGTFAAKQAL
RDVGRVFGLSQTDLSRWSKAIPKTLGIDLKTAYQQSPALKNLYQQSTRNQLMFKTALKIE
NLPRHYSTHAAGIVLSAHNLDETVALQQGGSDGALLTQQTKGNVEALGLLKIDFLGLHNL
TILNSAVTLIKQDFAADFQLTQIPLEDEATLKLFQAGDTDGIFQFESAGIKAVLRQLQPT
SFQDIVATNALYRPGPMKNIAHFIARKHHQEPISYPDDSLEPVLKSTYGILVYQEQVMQV
VSQMAGFTLAEADLLRRAMAKKNETLIAQKRDEFVSQSVKRGHQQQNAIKVYEYIERFAN
YGFNKSHAVAYSKLAYDLAYIKVHYPQAFFVSLLNSNINNDTKITIYLRALKLRKIQVLP
PSINLSQSYFSIENQHLRFGLLFIKKMRRDVINDILVKRQDNKYLNLVDFLRRLDVRFLK
ADNILPLVYSGALDEFSTNRRQLVQNVGDLVESIKLAAGSVSLFDIVKPKQHHVKDFSTS
EKLIQEKQYLGTYVSGHPIDRYKKALVAHNIQTIVDLNIGVTANVLYYVQNIKVIRTKKG
SNMAFLTGGDDIFDYSVTVFPRLYQNVEIEANQVYLIKLKVTNGQKQDKEYIAQNIELAE
TALKKPKAQHLYVRFQNKSNHNLQQLLQLIQQFPGNIPVVVYFADSDEKYLLKKQNKIAN
NKVVQKKLTDLVGLHNFIYQ
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctcaactccaagttttgagtagttatactttattgcaaagtactattagttta
aacaacctgatgaaacaggccaagcatttaggatataaacacttggcattaaccgatatc
aatgtaacttatggtctggttgaattctataagctagctcaaaaataccaaatacatcct
attttaggcataactattcaagttaatggcctcatagacacaaatgaaaaatatccacta
attgttttggcaaaaaacaatcatggatatcacaacttattaaaattatcaacttggatt
atgactcaagaagatccactgttaattacaacaaagtctgaattattaaatgatttaatt
atgattgtacctgcaaataagagtgaactaagcgctttgttggcaaataattcacaacaa
gtaactgagtatcttgcagctttaaagcaaataatgcagcaagatttatatttaggaatt
agtttgagaaataatttgcaagatcaggcccaattaattaatcgattagccaaattacat
cagataccctgtgtagctttggatgatgttcagtatttgcaaccggaagacgcctttagt
aatgaagtcttgcatcatattgcaagtggtgaaaaaattactcaatttattcgacagggc
gataattatttacgttctaaaaatgattttgttgctgattttcaaagtaaaaatttgcaa
accgcactggacaatactcaaatcattgctcaacaatgtcaagtacaaataccatttcaa
agaactttattacctcaattttccacccctaaaaaagtgtcatcaattgcatatttgcgc
aacttggtccaagctggtttgcacaatattttaggaccatctatttccgcaacttatcaa
aaacgtgctcagcatgaattaaatgttattgaaaaaatgggttatgctgattattttttg
atagtatgggatgccattaatcaggctcataaaatgaacattatgactggtccaggtcgt
ggttctgctgcgggctcattagtcagttacgctttaggaatcacgcaagtggatcctatt
caatatggcttattatttgaacgctttttaaatccggaacgggtagatatgccagatatt
gatttagatattccggataatcggcgtgatgaattagtacaatatatgcagcataaatat
ggcgatgatcatatggcccaaattataacttttgggacttttgctgctaaacaagcctta
cgtgatgtcggcagagtttttggacttagtcagacggatttaagtcgttggtctaaagcc
attcctaaaactcttggcattgatttaaaaactgcctatcaacaatcaccagctttaaaa
aatttgtatcagcaatcaacgcgtaatcagttaatgttcaaaacagctttaaaaattgaa
aatctgccacgacattattcaacacatgcagctggtattgtcttaagtgctcataacctt
gatgaaacagttgctttacaacaaggtgggagtgatggtgccttattaactcaacaaacc
aagggcaacgttgaagccttaggtttattaaaaattgattttttaggtctccataattta
acgattttaaattctgcagttacactaattaagcaggattttgctgccgattttcaatta
acacaaattcccttagaagatgaagcaactctaaaattatttcaagcaggggacactgac
ggtattttccaatttgaatcagcgggaattaaagcagtcttacgacaattacaaccaacc
agttttcaagatattgttgccactaatgcattatatcggccaggtcctatgaaaaatatt
gctcattttattgctcgtaagcatcatcaagaacctattagttacccagatgattcctta
gagccagtcttaaagtcaacttatggaatattggtttatcaagaacaagtaatgcaagta
gtatcccaaatggctgggtttactttagcagaagcggatttactgcgtcgagcaatggcc
aaaaaaaacgagactcttattgcccaaaaacgtgatgaatttgtttcgcaatcagtcaaa
cggggacatcaacagcaaaatgcaataaaagtttatgagtatattgaacgatttgctaat
tacggttttaataaatcacatgcggttgcatacagcaagctggcttatgacctagcttat
atcaaagtgcattatccgcaagccttttttgtatcactattgaattctaatatcaataac
gataccaaaataactatttatttacgtgcgcttaaactacgcaaaattcaagttttaccc
cctagtattaatcttagtcaaagttatttttcaatagaaaatcagcacttgcgttttggc
ctactattcatcaagaaaatgcggcgtgatgtgatcaatgatattttagttaagcgtcag
gataacaaatatcttaacttagttgattttttgcgtagattagatgtcagatttttgaaa
gcagacaatattttaccactagtgtatagcggagctttggatgaattttcgaccaatcgg
cggcagctcgttcaaaatgttggtgatttggtggaaagcattaaattggctgcgggcagt
gtttctttatttgatattgttaaacccaaacaacatcatgtcaaagatttcagtactagt
gaaaaactaattcaagaaaagcaatatttaggaacttatgtctcgggtcatccaattgat
cgctataaaaaagcgctggttgcccacaatattcaaacaatagtcgatttgaatattgga
gtaactgcaaatgtgctttattatgtacaaaatattaaagttattcgaactaaaaagggc
tctaatatggcttttttaactggtggagatgatatttttgattattcggtcacggttttt
ccgcggctttatcaaaatgtggagatagaagctaatcaagtttatttgattaagttgaaa
gtaactaatggtcaaaaacaagataaagaatatattgctcaaaatattgaactagctgaa
actgcactaaaaaaacctaaagcacaacatttatatgttcgttttcagaataaaagcaat
cacaatttgcaacaattattacaactgatacagcaatttccgggaaatattcctgtagtt
gtatattttgctgatagtgatgaaaaatatttactaaaaaaacaaaataaaattgctaat
aacaaggttgtacaaaaaaaattgacagatttagtaggtttgcataattttatttatcaa
tga
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