Bombilactobacillus bombi: DS830_04385
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Entry
DS830_04385 CDS
T06522
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lbm
Bombilactobacillus bombi
Pathway
lbm03030
DNA replication
lbm03430
Mismatch repair
lbm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DS830_04385
03430 Mismatch repair
DS830_04385
03440 Homologous recombination
DS830_04385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbm03032
]
DS830_04385
03400 DNA repair and recombination proteins [BR:
lbm03400
]
DS830_04385
Enzymes [BR:
lbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DS830_04385
DNA replication proteins [BR:
lbm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DS830_04385
DNA repair and recombination proteins [BR:
lbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DS830_04385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AXX64753
LinkDB
All DBs
Position
848769..849305
Genome browser
AA seq
178 aa
AA seq
DB search
MNFVAMDFETANGRGSSACSLALALVENNQITDTFYTLINPLQDFNYRNIAIHHIRPADV
EKAPTFDQIWPHIQDLFTLDNIVAAHNANFDIRVLRQTMAMFNLQAPSYYAIDTVRTSRK
LYPEMPNHKLNTVASLLKIPLHHHHHALDDTIACAEILIKTAAQFGEEPIKKMTKIIS
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgtggcaatggattttgaaactgctaatggtcgtggttccagcgcttgttca
ttagcgttagctttagtcgaaaacaatcaaatcacggatactttttatacgttgattaat
cctcttcaagactttaattatcgtaatattgcaattcatcatattcgaccagcagatgtg
gaaaaagctcctacatttgatcaaatttggcctcatatccaagatctttttactttggat
aatattgttgcagcccacaatgctaactttgatattcgagttttacgccagacaatggca
atgtttaatttacaagcgccatcttattacgcaatagatactgtgcggacttcccgtaaa
ttatatcccgaaatgcctaatcataaattgaacactgttgccagtttgttaaaaatacct
ctccatcatcaccaccacgctcttgatgataccattgcttgtgcagaaattctaattaaa
actgctgcgcaatttggtgaggaaccaattaaaaagatgaccaaaattatttcttag
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