Bombilactobacillus bombi: DS830_04635
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Entry
DS830_04635 CDS
T06522
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lbm
Bombilactobacillus bombi
Pathway
lbm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DS830_04635 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbm03400
]
DS830_04635 (uvrA)
DNA repair and recombination proteins [BR:
lbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DS830_04635 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DS830_04635 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
nSTAND1
RsgA_GTPase
AAA_29
AAA_21
AAA_33
nSTAND3
DnaJ_CXXCXGXG
AAA_22
AAA_23
AAA_15
NACHT
nSTAND6
MMR_HSR1
AAA_24
SLFN-g3_helicase
DUF87
Dynamin_N
Viral_helicase1
cobW
YobI-ATPase
BCA_ABC_TP_C
NB-ARC
PRK
Motif
Other DBs
NCBI-ProteinID:
AXX64799
LinkDB
All DBs
Position
complement(893691..896528)
Genome browser
AA seq
945 aa
AA seq
DB search
MVNDNIVIHGARSHNLKNIDVTIPRNKLVVMTGLSGSGKSSLAFDTLYAEGQRRYVESLS
SYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTATEINDYLRLLWARVGTP
VCPNDGTIISRQSVEQMVDRLLKLPERTKLQILSPVIRSKKGQHKKVLAQIAKQGYVRVI
IDGEQHDITDEIELNKNQQHNLQVVVDRIVIKDGIRSRLFDSIESALRLSGGYMTADIIG
GEPLVFSEHYACPLCGFTVGELEPRLFSFNAPFGACPDCDGLGMKLEVDLDLVIPDRHLT
LNQGAIVPWNQEHSQYYPHLLQQAAAQFGIDQDTPFNKLPQNQQDFLLYGSDKQQFHFHF
DNDFGSVRDVDTTFEGVIPNIAHRYRKPSSAFMRDIMRKYMTESVCQTCHGTRLNRKALS
VQIAQQNIAEVSDLPIKAALPFFKSIKLSPQNTVIAQPILKEVIDRLTFLQNVGLDYLTL
SRSAGTLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIRSLKAMRDLGNT
LIVVEHDEDTMRQADYLIDVGPGAGAAGGQIVAAGTPQEVAANPDSLTGQYLAGKKYIPL
PTKRRNGTGQSVKIYGAAENNLKNIDVEFPLGKFIAVTGVSGSGKSSLVNQILQRALAQK
LNHNNHRPGKFQKITGFEDLKTLVNIDQSPIGRTPRSNPATYTGVFDDIRDLFAKTNEAK
VRGYTKGRFSFNVKGGRCEACKGDGIIKIEMNFLPDVYVPCEVCHGTRYNSETLQVTYKG
KNIAEILQMTVAEALEFFEHLPKIERKLQTIADVGLGYVQLGQSATTLSGGEAQRMKLAS
ELYKKSDGHNFYILDEPTTGLHVDDIKRLLDVLQRLVDQGNTVVVIEHNLDVIKSADWII
DLGPEGGDLGGQVVAIGTPEQIVQVKESYTGQYLKPVLEKFETLE
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggtaaacgataatattgtcattcatggtgctcgttcgcataatttgaaaaatattgat
gtcaccattcctcgtaataaattggtagtgatgactgggctttcaggctctggaaaaagt
tcacttgcgtttgataccctttatgcagaagggcaacgacgttatgttgaaagtctctcc
tcttatgcgcggcagtttttgggacaaatggataaacctgacgtcgattcaattgatgga
ttgagtccagcaatttctattgatcaaaaaactacgtccaaaaaccctcgttctactgtt
ggtaccgctactgaaattaatgattacttgcggcttttatgggcgcgagtagggacgcca
gtatgtcctaatgatggtactattattagtcgacaatcagtcgaacaaatggtggatcgg
ttattaaaattgcccgaacgaaccaaattacaaatcttatcgccagtaatacgcagtaaa
aaaggacaacataaaaaagtattagcacaaattgccaagcaaggatatgtacgggtaatt
attgacggtgagcaacatgatattactgatgagattgaattaaataaaaatcaacagcat
aatttgcaagtcgttgtggatcgaatagtaattaaagatggcatccgttcacgactattt
gactctatagaatcggccttgcgcttatcaggtgggtatatgaccgcagatataattggt
ggtgagcccttagtattttcagaacactatgcttgtcctttatgtggttttacagtagga
gaattagagccacggcttttttcttttaatgcaccttttggggcttgtccagattgtgat
ggcttaggtatgaagttagaagtggatttggatttagtaattcccgatcgtcatttaacc
ttgaatcaaggagcgatagttccttggaaccaagaacattcacagtattatccacattta
ttacaacaagctgctgcgcaatttggaattgaccaagatacaccatttaataaattgccc
caaaaccaacaagattttttgctttatggctctgataaacagcaatttcattttcatttt
gataatgattttggtagtgtacgtgatgttgatactacatttgaaggtgtcattcctaat
attgcccatcgttatcgcaagccttcaagtgcttttatgcgagatattatgcgcaaatat
atgactgaatcagtttgtcaaacttgtcatggtacacgtttgaatcgtaaagctctcagc
gtacaaattgctcagcaaaacattgctgaggtctcagatttacctatcaaagcagcatta
ccattttttaaatctattaagttatcaccacaaaatacagtaattgcccagccaatttta
aaagaagtaattgatcggttgacatttctgcaaaatgtcggtttggattacttgacactt
tcgcgttcggcgggaactctatcaggtggagaagcccaacgcattcgcttagctactcaa
attggttctaacttatccggagtattatatattttagatgaaccttcgattggtttgcat
caacgtgataatgatcgattaattcgttcgcttaaagctatgcgagatttaggtaatacc
ttaattgttgtagaacatgatgaagatacaatgcggcaggctgattatttgattgatgtt
ggtcctggtgcgggtgcagcgggaggacagatagtagcggcaggcacacctcaagaagta
gctgccaatcctgattctttaacagggcaatatttggccggcaaaaaatatattccatta
cccacaaaacgtcggaatggcacgggtcaatctgtcaaaatttatggtgctgctgaaaac
aatttgaaaaatattgatgtcgaatttccacttggaaaatttatcgctgtcactggggtt
tcgggttcgggaaaatcatctttagtgaaccaaattttacaacgagccttagcacaaaaa
ttgaatcataataatcatcgtcctggtaaatttcaaaaaattaccggttttgaagattta
aaaacacttgttaatattgatcaaagtccgataggacgtactccgcggagtaatccagcg
acctatacgggagtttttgatgatatacgtgatttatttgctaagactaatgaagccaaa
gttcgaggctatactaaaggacgtttttcctttaatgttaaaggtggccgttgtgaagca
tgtaaaggggacggcattattaaaattgagatgaattttttgccagatgtttatgtacct
tgtgaagtttgtcatggtacgcgctataactcggaaactttacaagtcacctacaagggt
aagaacattgcggaaattttacaaatgaccgttgcagaagctttggaattttttgagcat
ttacccaaaattgagcgtaaattacagacaattgcggatgtcggcttagggtatgttcaa
ctaggacaatcggctactactttgtctgggggagaagcccagagaatgaaattagcgtca
gaactctataagaaatcagatggtcataatttctatattttggatgaaccgactacgggt
ttacatgttgatgacattaaacgtttgttagatgtgctgcaaagactggttgatcaaggt
aatacagtagttgtgattgaacataacttagatgtgattaaatccgcagattggattatt
gatttgggaccagaaggcggcgacttaggtggacaagttgtagctattggaacaccggag
caaattgtacaagtcaaagagtcttacactggacaatatttgaaaccagttttagaaaaa
tttgaaacacttgaatag
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