Bombilactobacillus bombi: DS830_04815
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Entry
DS830_04815 CDS
T06522
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lbm
Bombilactobacillus bombi
Pathway
lbm00521
Streptomycin biosynthesis
lbm00523
Polyketide sugar unit biosynthesis
lbm00525
Acarbose and validamycin biosynthesis
lbm00541
Biosynthesis of various nucleotide sugars
lbm01100
Metabolic pathways
lbm01110
Biosynthesis of secondary metabolites
lbm01250
Biosynthesis of nucleotide sugars
Module
lbm_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lbm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DS830_04815 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DS830_04815 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DS830_04815 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DS830_04815 (rfbB)
00525 Acarbose and validamycin biosynthesis
DS830_04815 (rfbB)
Enzymes [BR:
lbm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DS830_04815 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
Sacchrp_dh_NADP
NmrA
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
AXX64833
LinkDB
All DBs
Position
complement(933842..934873)
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AA seq
343 aa
AA seq
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MLKKILVTGGAGFIGSNFVHYLVQNQPQTQITVLDKLTYAGNRENLAGLPSNRVKLVVGD
ICDAQLVDNLIAQTDAVVHYAAESHNDNSLNNPDPFIQTNIVGTYTLIQACRKHNVRYHH
ISTDEVYGDLPLREDLPGHGEGIGEKFTPTSRYNPSSPYSASKASSDLLVHAWVRSFGLR
ATISNCSNNYGPYQHIEKFIPRQITNVLCGIRPKLYGSGKNVRDWIHTKDHSHAVWSILT
QGTIGETYLIGANGERNNRDVLELILKLMHQPVDAYDEVKDRPGHDLRYAIDATKLRTEL
GWQPQYTDFEAGLKQTIDWYRNHREWWINDKQAVESEYQKNGQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaaaattttagtaactggaggagccggctttattggctctaattttgtacat
tatttagttcaaaaccaaccccaaacacaaataacagttctagataaattaacgtatgca
ggtaatcgagaaaatttagcaggattgccttctaatcgagttaaattagttgttggggat
atttgtgatgcccaattagtagataatttaatagctcaaactgatgcggttgtacattat
gctgctgaaagtcacaatgataattctttaaataaccctgatccttttattcaaactaat
attgtgggtacctatacattaattcaagcatgccggaagcataacgttcgttatcaccac
atttccactgatgaagtgtacggtgatctcccattgcgagaagacttaccgggtcatggg
gaaggtataggtgagaaattcacacctactagtcgttataatcccagcagcccttattca
gcttctaaagccagttcggatttattagtacatgcctgggtacgttcttttgggttaaga
gctactatttctaattgctccaataattatggaccttatcagcatatcgaaaagtttata
cctcgtcagattacgaatgttttgtgtggtattcgtccaaagctgtatggcagtggaaag
aatgtccgcgactggattcatacaaaagaccattcacatgctgtttggtcgattttaacg
caaggtacaattggtgaaacttatttaattggtgctaatggtgaaagaaataaccgcgat
gttttagaattaatattaaagttgatgcaccagcctgtggatgcttatgatgaagtgaaa
gaccgaccagggcatgatttacggtatgcgattgatgctactaaattgcgcacggaatta
ggctggcagccacaatatacagattttgaagcaggattaaaacaaacaattgactggtat
cgtaatcatcgtgagtggtggattaatgataaacaggccgtagaaagtgaatatcaaaaa
aatggccaataa
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