Bombilactobacillus bombi: DS830_05290
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Entry
DS830_05290 CDS
T06522
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lbm
Bombilactobacillus bombi
Pathway
lbm03420
Nucleotide excision repair
lbm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DS830_05290 (pcrA)
03430 Mismatch repair
DS830_05290 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbm03400
]
DS830_05290 (pcrA)
Enzymes [BR:
lbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DS830_05290 (pcrA)
DNA repair and recombination proteins [BR:
lbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DS830_05290 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DS830_05290 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DUF2624
PYRIN
FWWh
DUF676
ResIII
Motif
Other DBs
NCBI-ProteinID:
AXX64923
LinkDB
All DBs
Position
complement(1030780..1033011)
Genome browser
AA seq
743 aa
AA seq
DB search
MAEVAILKGLNDQQKKATVATQGPLLILAGAGSGKTRVLTHRIAYLIKEKQVMPWHILAI
TFTNKAAREMQERVTKLLGDQAAGVWVSTFHSMCARILRHEAEAINYSRAFTITGSSEQL
TLIKQILKQENLDPKQNNPRTILSMISQAKNELQTPADFATAAKTLFEETVAKIYRRYQQ
ALFENQSMDFDDLIMKTIELFEKNPLILANYQDKFHYIHVDEYQDTNDAQYRLVHLLADK
YHNLCVVGDGDQSIYGWRGANMENIMNFEKDYPQAQTILLEQNYRSTKIILQAANEVISN
NNYRKPKKLWTDNEQGEKITYYRADNEQSEAIYVIDQIKKRCQKEHLKYTDFAILYRTNA
QSRILEDRLLKANIPYQIIGGHKFYDRKEIRDVLAYLQLIANPKDSLSFERIVNVPKRGI
GATSLDKLREYALQKHLSLLEAARQASTAPLTSRVSHKFEQFAQMMDLLIRHRGGQTITE
LMTAVLEQSGYQSDLEKQNNLEAQTRLENIKELLTVTQQFDQEYEPVDEDADPLNDFLAD
LALVSSEDTSDTDSDQVTLMTLHAAKGLEFPVVFLVGMEEGIFPLARALSEPDELEEERR
LAYVGITRAQTKLYLTNAYNRMLYGKTQSNQPSQFIQEIKPELLDLENSSEQPEDFNRPT
TRYPFAETPAHKSQSAPTKPQVAGKTTAGSVDWQLGDQVEHKKWGLGTVVKVSGHGENAE
LDIAFNQEGIKRLLAEFAPIKKV
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtcgcaattcttaagggattaaatgaccagcaaaaaaaggccacagtagct
acgcaaggacctttattaattttggcaggagctggtagcggcaaaactcgagtgttaact
catcggattgcttatttaattaaagaaaaacaagtaatgccctggcatattttggctatt
acttttaccaataaggctgctcgtgaaatgcaagagcgagtaactaaattattaggtgat
caagcagccggtgtatgggtatcaacttttcattcgatgtgtgctcggatattgcggcat
gaagccgaagcaattaattatagtcgggcctttacaatcacaggttcttcagaacaatta
actttaatcaaacaaattttaaaacaagaaaacttggatcctaaacaaaataatcctcgg
actattttgagtatgattagccaagccaaaaatgaattgcaaacaccagccgattttgcc
acggcagctaaaactctgtttgaagagacagtggccaagatatatcggcgttatcaacaa
gcattatttgagaatcaaagtatggattttgatgatttaattatgaaaacaatagaatta
tttgaaaaaaatccattaattttggctaattatcaagataaatttcactatatccatgtt
gatgagtatcaagatactaatgatgctcagtatcgcttagtgcatctattggctgataaa
tatcataatttatgcgttgtgggtgatggtgaccaaagcatttacggttggcggggtgcc
aacatggaaaatattatgaattttgaaaaagattatccacaggcgcagaccattttactg
gaacaaaattaccgctctacgaagattattttacaagcggctaatgaggtgataagtaat
aataactatcggaaacccaaaaagttatggaccgataatgagcaaggcgaaaaaatcacc
tattatcgcgctgacaatgaacaaagtgaagctatttatgtcattgatcaaatcaaaaaa
cgctgtcaaaaggagcatttaaaatataccgattttgcgattttatatcgcactaatgcc
caatcgcgaattttagaagatcgattactgaaagcaaatattccttaccaaatcatcgga
ggtcataagttttatgaccgcaaagaaattcgggatgttttggcttatttgcagttgatt
gctaatcctaaagattctttaagctttgaacggattgtcaatgtacccaaacgcggtatt
ggtgcaacttcattagataaattgcgcgaatatgctttgcaaaagcatttaagtctctta
gaagccgctcgccaagctagtactgctcctttaacaagtcgtgtgagtcataaatttgag
cagtttgcccaaatgatggatttgttgatcagacatcgcggtggccaaaccattacggaa
ttaatgactgccgttttggaacaaagcggttatcaaagcgatttagaaaagcaaaataat
ttagaagctcaaacccgcttggaaaacatcaaagaattattaactgtaactcaacaattt
gatcaagaatacgaaccagttgatgaagatgcagatcccttaaatgattttttggcggac
ttggcgctggttagcagtgaggatacgagcgatactgattcagatcaagttaccttgatg
accttgcacgcagctaagggattggaatttccggttgtgtttttagtcggaatggaagaa
ggaatttttcctttagcacgtgctttaagtgaacctgatgaattagaagaagagcgacgg
ctggcttatgtgggaattaccagagcgcaaactaagctttatctaacaaatgcctataat
cggatgctttatggtaaaactcaatctaatcaaccttcccaatttatccaagaaatcaag
ccagagttattggacttagaaaactcttcagaacaaccggaagactttaatcggcccaca
acaaggtatccttttgctgaaacaccagctcataaatcccaatcagcgccaaccaaaccg
caagtagcaggtaaaaccacagctggttccgttgattggcagttgggcgatcaagttgaa
cataagaaatggggtttaggtacagttgtgaaagttagtggtcacggtgaaaatgctgaa
ctggatattgctttcaaccaagaaggcattaagcggctattagcggagtttgcaccgatt
aaaaaagtttaa
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