Bombilactobacillus bombi: DS830_05900
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Entry
DS830_05900 CDS
T06522
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lbm
Bombilactobacillus bombi
Brite
KEGG Orthology (KO) [BR:
lbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbm03400
]
DS830_05900
DNA repair and recombination proteins [BR:
lbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DS830_05900
Archaeal homologous recombinant proteins
DS830_05900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
Motif
Other DBs
NCBI-ProteinID:
AXX65032
UniProt:
A0A347SSM3
LinkDB
All DBs
Position
complement(1171748..1174885)
Genome browser
AA seq
1045 aa
AA seq
DB search
MKPLKLVMQNFGPYAKQSLDFTKLAATDIFLISGRTGCGKTTIFDALTFALYGEGISDDR
KPESLRSDFADDRTPTQVDLEFEHQDLIYHVMRQPKQTLAKKRGSGQKVYESTGRLEIFR
ADTKIAEINKLKDISIKIESVLQLSRKQFVQIVLLPQGDFRRFLMADSKDKEGVLRQIFK
TGLYQRWSEVLNNQLKEQKNQQQQWQTAITSELAKVTWNQPPENLTDLNPQQQLKLLKEQ
QTTAHQTLATLETQQQQLEQQYQQQQTSYHDAQKQNQRWQDLKAQQQRLSDLIGQSEAMK
QKQQLIAQLKWAQSQQSDYRHYQELQTAMTTKQEQLQQLTQTITTTEQQQSQLQQEQQQL
TAQKPLQDQRLQEQPLLKNQRPAFAQVEQLQTKLTKSQNALTASQQQVDALHQQQQQLQQ
EQAALTQAVAELPTIVEQLHQVQQDQSQLLNLQQQADKLQTAQQKNQKLTNQITQAQKNL
VTAKDQVAALEASYQQLHNQWLESQIANLVAQLEPGTPCPICGSIEHPQPATINTVQAVS
NEQVKSAEEKLRTQTAKQSELESALKEKQQQLTQATTQWQQDLTDLKQKLAQHQLITVIP
EQLIDIITNLQAALDQQQIQLTRLQTQRTQLTAQNQQLDQIQQQLKTLEPTVEIAVTQLQ
QQQTEYQKLQVQLADAKQQLPADYPNLQALDKYLQQLQQAIKDYETTVQTNTQKLQQTEQ
QLAAAKASQDHIQQDYQQTNTQLQQIQAQLTQALQAQLQTSDWQILVQLLEQLPQLPQYE
QQLNTYQQELLQVQTKAEELQKIIGDQQPVDLTVAKDQLQRAEQQLQTARQTYNQERDQI
NLNDAHLQAVEQSLQQIAGQQADINELQLLVETVNGRGEAKLGLERYVLRAQLVEILQVA
NEHLQQLSSGRYFLTLHKEIGTFQKNTGLEIDVYDDNVGQKRSVHTLSGGESFIAALSLA
LALGEVIQNESGGIKIDTLFIDEGFGSLDQDSLATALDALQNIESSSRMIGIISHVTLLQ
ERIPYQIKVTTQGQGKSTAQIIVPA
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccgttaaaattagttatgcaaaacttcggcccatatgccaaacaaagtttagat
tttactaaactggctgctacggatatttttttgatttcaggacgcacaggttgtggaaaa
actactatttttgatgctttgacttttgctctttatggcgaaggcattagtgatgatcgt
aagccagaaagcttgcgttctgactttgctgatgatcgaacaccgacacaagtagattta
gaatttgagcatcaagatttaatttatcatgtaatgcgtcagcccaaacaaacactagcc
aaaaaacgcggttcaggacaaaaagtgtacgaaagcactggccgtttagagatctttcga
gctgataccaaaattgcagaaattaataaattaaaagatattagtatcaaaattgaaagt
gttctgcaattaagtcgtaaacaatttgtgcagattgttttattaccacaaggggatttt
cggcgctttttgatggctgatagtaaagacaaagaaggagtcttgcggcaaattttcaaa
actggcttataccaacgctggagcgaagttttgaataatcaacttaaagaacagaaaaat
cagcaacagcaatggcaaaccgctataacttcagaattggctaaagttacttggaaccaa
ccaccagaaaatttaactgacttaaatccacagcaacaattaaaactactaaaagaacaa
caaactaccgctcatcaaactttggcaactttagaaacacaacagcaacaattagaacaa
caatatcaacaacagcaaacctcttaccatgatgctcaaaaacaaaatcaacgctggcaa
gatttaaaagctcagcaacagcgcttaagcgatttgatagggcaatctgaagcgatgaag
caaaagcaacaattaattgctcaattaaagtgggctcaaagtcaacaaagtgattatcgt
cattaccaagaattacagactgcaatgacaacgaaacaagaacaattacaacaattaaca
caaacaatcactacgactgaacaacagcaaagtcaattacaacaagaacaacaacaatta
acagcgcaaaaacccttacaagatcaacgtttgcaagagcaacccttattaaagaatcaa
cggccagcctttgcacaagttgaacaattacaaaccaaattgactaagtcccaaaatgct
ttgacagctagtcaacaacaagtagatgcattgcaccagcagcaacaacagctacaacaa
gaacaagctgcactcacccaagctgttgcagaattaccaacgattgttgaacaattacat
caagtccagcaagaccaaagtcaattgcttaatttacaacaacaggctgataaattacaa
actgcgcaacaaaagaatcaaaaattaacaaaccaaattactcaagcacaaaaaaatctt
gtcactgcaaaagatcaagtggcagcattagaagctagttaccaacaactgcataatcaa
tggctggaaagtcaaattgcaaacttggtcgcacaattagaaccaggaactccttgtcca
atttgtggaagtattgaacatcctcagccagcaactatcaatacagttcaagccgtatct
aatgaacaagtaaaaagtgccgaagaaaaattgcgcacccaaacagctaaacaatcagaa
ttagagtcagctttaaaagaaaagcagcaacaattaactcaagcaacgacacaatggcag
caagatttaacagatttaaaacaaaaactagcacaacaccaattaataactgtcattcct
gaacaactaattgatattattactaacttacaagcagctttggatcaacaacagattcaa
ttaactaggttacaaactcagcgcacccaattaaccgctcaaaatcagcaattagaccaa
attcagcagcaattaaagactttagaaccaacagttgaaattgccgtgacacaattgcag
caacaacaaacggaatatcaaaaactgcaagtccaacttgctgatgctaagcaacaatta
ccggctgattatcctaatttgcaggctttagataaatatttacagcagttgcaacaagca
ataaaagactatgaaactacagtgcaaactaatactcaaaaattacaacaaactgagcaa
caattagctgctgccaaagcttctcaagatcacattcaacaagattatcaacaaacaaat
acccaattacaacaaatccaagcacaactgacacaggcattacaggcgcaattgcaaaca
agtgattggcagatattagtgcaattgttagaacaattaccacaattgccacagtatgag
caacaattgaatacttatcaacaagaacttttgcaagtccagaccaaggctgaagaatta
caaaaaatcattggtgaccaacaaccagttgatttaaccgtagctaaggaccagttacaa
cgggcagaacaacaactgcaaacagctcgccagacttataatcaagaacgcgatcaaatt
aatcttaatgatgcgcacttacaagctgtggaacaaagtttgcagcaaattgctggccaa
caagcagatattaatgaattacaactcttagtagaaacagtaaatggtcgtggtgaagct
aagttaggcttagaacgttatgtcttgcgagcacaactggtggaaattttgcaagtagca
aatgagcatttacaacaattaagttctggtcgttatttcttaactttgcataaagaaatt
ggtactttccaaaaaaataccggtctggaaattgatgtttatgatgataatgtcggccaa
aagcgcagtgttcataccctgtctggtggtgaaagttttattgcggctttaagtttggcg
ttagctttaggagaagtgattcaaaatgaatctggtggaattaagattgatacgctcttt
attgatgaaggatttggttctttggatcaagactctttagctactgctttagacgcttta
caaaatattgaaagcagcagccgcatgattggcattatcagtcatgtcacgttattgcaa
gaacgcatcccttaccaaatcaaagtaactacacaaggacaaggcaaaagtaccgcgcaa
attattgttcccgcctaa
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