Bombilactobacillus bombi: DS830_06260
Help
Entry
DS830_06260 CDS
T06522
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lbm
Bombilactobacillus bombi
Pathway
lbm03420
Nucleotide excision repair
lbm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DS830_06260
03430 Mismatch repair
DS830_06260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbm03400
]
DS830_06260
Enzymes [BR:
lbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DS830_06260
DNA repair and recombination proteins [BR:
lbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DS830_06260
MMR (mismatch excision repair)
Other MMR factors
DS830_06260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
AAA_19
SLFN-g3_helicase
UvrD-helicase
UvrD_C_2
Viral_helicase1
PhoH
DEAD
AAA_30
AAA_11
AAA_16
NACHT
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AXX65100
LinkDB
All DBs
Position
complement(1260966..1263254)
Genome browser
AA seq
762 aa
AA seq
DB search
MAEKDKRQEQQHLNAIIDQIKRAEQKLARSITNAKADIDDINRTFGDDVHIGAGDDSISI
AGALSIHQQQQMLAERNNAWQRSQQQLSVLQKLEKNPYFARIDFRELPSGHPETIYIGLA
SFTDAQNHFLIYDWRAPISSIYYDGNLGQVTYQTPDGEQVVEVSLKRQFIIEEGQIVSLF
DTQETIGDQMLLTALSHNASTQMQGIVTTIQQEQNQIIRDTRSDLLFVQGAAGSGKTSAI
MQRVAYLLYRYRKKLTSGQVVMFSPNMLFNDYVSQVLPEMGEQNMVQMTYLQYVARRLPK
VQVQDLYEQFEAIQQDTITPATRFVSDLAFFKLVTSYAQQLQQGGVHFRNLYFRKQVLIS
RAQIANIYYGFGPQYTLLNRIDGTKEALIKIVQRKISSEMRKKWVQEQIQNLSQEELRQM
YDYPDQEFKNSDDETKFLARKIVTNALRPVVKKIRHNSFINIAATYYEFLKVVPQLLPLT
KYQVSDAQWQNFVAQFAADWSQHKISLANISPYLYLYDLLTGHHGDLTMKFVFIDEIQDY
TPFQLAYLQYNFPRARYTMLGDLNQAILTHDNSQTLLKEITRLFDSEKTRVIQLTHSYRS
TKQITEFTKHLLTVGEKIIPFNRPGDLPNIKVSASAEQMLQATREQLRANQQQNYATAII
TKDLSQAQQLQQQLQQHVPVTLIKSENQRLATGDLVIPAYLAKGLEFDAVIMWNATAGQF
TNQDQQLIYTITSRAMHRLSIIANQQLDPIIAAVPKDLAQWQ
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaagataagcgacaagaacagcaacatttaaatgcaattattgaccaaatt
aaacgtgctgaacaaaaattagctcgtagtattactaatgccaaagcagatattgatgat
attaatcgtacctttggtgatgatgtccacattggcgccggtgatgattcgatttccata
gcgggtgctttgtcaattcatcaacagcaacaaatgctggcagaacggaataacgcttgg
caaagatcacaacaacaattaagtgttttacaaaaattagaaaaaaatccttatttcgcc
aggattgattttcgagaattacctagcggacatccagaaacgatttatattggtttggcc
tcgtttacagatgcacaaaatcatttcttgatttatgattggcgagcaccaatttcttca
atttattatgatggcaatttaggccaagtaacctatcaaactcctgatggagagcaagtt
gttgaggtatcactaaagcgacaatttattattgaagagggtcagattgtttcactattt
gatacacaggaaactattggtgatcaaatgttattgactgccctgagtcacaatgcttct
acgcaaatgcagggtattgtaacgaccattcaacaagagcaaaaccagattattcgtgat
actaggtctgatttattatttgtgcaaggtgcagcgggctcggggaaaacttcagcgatt
atgcagcgagtggcttatttattatatcgttatcgtaaaaagttaacttctggtcaagta
gtaatgttttctcctaatatgctctttaacgattatgtcagtcaagttttgcccgaaatg
ggtgagcaaaacatggtgcagatgacttatttgcagtatgtagcccgtcggttacctaaa
gtgcaagtccaagatttatatgaacaattcgaagccattcaacaagatacgattacgcct
gcgactcgctttgtcagtgatttagcttttttcaagttagtcactagttatgcccagcaa
cttcagcaagggggagttcacttccgcaatttgtattttcgcaaacaggttttgatttcg
cgtgcgcaaattgccaatatttattatggttttggcccacaatataccctgttaaatcga
attgatggtactaaagaagcattaatcaagatagtgcaacgtaagattagtagtgaaatg
cgtaaaaaatgggttcaagaacaaattcaaaatttaagtcaagaagaattacgccaaatg
tatgattacccagatcaagaatttaaaaatagtgatgatgaaactaaattcttagcccgc
aaaattgttaccaatgctttgcgtccagtggttaaaaaaattcgacataatagttttatt
aatattgctgccacatattatgaatttttaaaagttgtgccgcaactgctgccattgacc
aaataccaagttagtgatgcacaatggcaaaattttgtagctcaatttgcagcagattgg
tcacaacacaaaatttcgttagctaatatttcaccatatctgtatttatatgatttgctt
actggacatcatggtgatttaacaatgaaatttgtttttattgatgaaattcaagattat
acgccattccaactagcctatctgcagtacaattttccgcgtgctcgctatacaatgttg
ggtgatttgaatcaggctattttgactcatgataactcacaaacacttttaaaagaaatt
actcgtttatttgattctgaaaaaacacgtgttattcaactcacgcattcttatcgatct
acaaagcaaatcacggaatttactaaacatttattaactgtgggtgagaaaattattcct
ttcaaccgaccaggtgatttacccaatattaaagtatcagcttctgctgaacaaatgttg
caagctacacgtgaacaattacgagctaatcagcaacaaaattatgccactgcgattatt
accaaagacttatcccaagcacaacaattacaacaacaactgcaacaacatgttcctgta
actttaattaagtcggaaaatcaacggttggccacaggtgatttagtcattccggcgtac
ttagccaaggggttagaatttgatgctgtcattatgtggaatgctaccgctggtcaattt
actaaccaggaccaacaattgatttatacaattacttcgcgggccatgcatcgcttaagt
attattgccaaccaacaattagatccaattattgcagctgttccgaaagatttagcccaa
tggcaataa
DBGET
integrated database retrieval system
