Bombilactobacillus bombi: DS830_06570
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Entry
DS830_06570 CDS
T06522
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lbm
Bombilactobacillus bombi
Pathway
lbm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DS830_06570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbm03400
]
DS830_06570
Enzymes [BR:
lbm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DS830_06570
DNA repair and recombination proteins [BR:
lbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DS830_06570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF6327
Motif
Other DBs
NCBI-ProteinID:
AXX65159
LinkDB
All DBs
Position
complement(1324412..1325272)
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AA seq
286 aa
AA seq
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MEYQFISWNIDSLNAALTGKSPRSDLTRAVLQKIVQLHPTVLAIQETKLSADQNKVKKLL
QLLTDYFPNYAVEYRISEPPARKGYAGTMMLYLKSLPQPQVTFPHIGAPEPTDDEGRMIT
LEFPEFFVTTVYTPNAGQDLNRLALRQEWDDCYRQYLTQLDQQKPVLACGDFNVAHEEID
LAHPQNNHHSSGFTDEERKKFSQLLAAGFTDSFRYLYPQAQGFYQEQRSVYTWFPQRVRT
SKQNNSGWRIDYWLVSNRLADKIEISEPLATGERQDHLPILLKFSM
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcaatttattagttggaatattgactccttgaatgcagctttaactggaaaa
agtcctcggagtgacttgactcgagcagttttgcaaaaaattgttcagctacaccctaca
gttttagctattcaagaaactaaattatctgctgatcaaaataaagtgaaaaagctatta
caactcttaacggattattttccaaattatgcggtagaatatcggatatctgaaccacca
gctcgtaaaggttatgcaggaactatgatgttatatctcaagtctttgcctcagccacaa
gtcactttcccacatattggagctcctgaaccaacagatgatgaaggacggatgattaca
ctcgaatttccggaattttttgtcacgactgtttatacccctaatgcaggacaagatctt
aatcgtttagccttacggcaagaatgggatgattgttatcgacagtacttgactcaatta
gatcagcaaaagccggtcttagcttgtggagatttcaatgttgctcatgaagaaattgac
ctagctcatccacaaaataaccatcattcttctggatttacagacgaagaacggaaaaaa
ttttcacaattgttggcagcaggttttactgatagttttcggtatttatatccccaagct
caaggattttatcaagaacaacgaagtgtttacacttggtttccccaacgagtacgaacc
agtaagcaaaacaattctggttggcgcattgactattggttagtttcaaaccgtttagct
gataaaattgaaatttccgagcccttagcgactggagaaagacaggatcatttaccaatt
ttattaaagttttccatgtaa
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