Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_0006
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Entry
LBUCD034_0006 CDS
T02244
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbn03032
]
LBUCD034_0006 (gyrA)
03400 DNA repair and recombination proteins [BR:
lbn03400
]
LBUCD034_0006 (gyrA)
Enzymes [BR:
lbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LBUCD034_0006 (gyrA)
DNA replication proteins [BR:
lbn03032
]
Prokaryotic type
DNA Topoisomerases
LBUCD034_0006 (gyrA)
DNA repair and recombination proteins [BR:
lbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LBUCD034_0006 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AFR99120
UniProt:
J9W4D9
LinkDB
All DBs
Position
6624..9176
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AA seq
850 aa
AA seq
DB search
MANKDNHDEPIAGRVTNVDLSKKMRTSFLDYAMSVIVARALPDVRDGLKPVHRRILYDMH
ELGVTPDKPYKKSARIVGDVLGKYHPHGDTAVYESMVRMAQDFSYRYMLVDGHGNFGSVD
GDGAAAMRYTEARLSKIAMEMLRDINKDTIDFQPNYDGTEREPSVLPSRFPNLLVNGASG
IAVGMATNIPPHNLSEVISAIHVLMKNPDATTADLMEALPGPDFPTGGVVMGKSGIRKAY
ETGKGTIIVRAKVEIEGEAGGKQRIIATELPYMVNKAKLIERIAELARDKRIEGITDIND
ESDREGMRVVIDVRRDASAEVILNNLYKLTLMQTSFSFNMLAIVKGTPKILSLKEILNYY
LEHQVEVIQRRTKYELNKAQARAHILEGLRIALDHIDEIIKIIRGSQTGDVAKNQLIEGF
GLDDKQAQAILDMRLVRLTGLEREKIDKEYNQLMKDIEEYKAILASRERVNEIIYQELLE
IQNKFGDPRRTELLVGEVLSLEDEDLIEEEDVIISLTHNGYIKRLPTSEFKAQNRGGRGV
QGMGVHNDDFVEHLVSTSTHDVLLFFTDAGKVYRMKGYEIPEYGRSAKGIPVINLLNIGN
NEKIQAVINVSDKNNDIEKDLFFVTLMGTVKRTPVSDFANIRSNGLKAINLKDDDQVSNV
LIASEDQNIIIGTHRGYAVSFNAADVRSMGRSATGVRGVRLRENDYVVGSDILKPDSEVF
IISENGYGKRTPAAEYPIKGRGGKGIKTANITEKNGPLAGLTTVNGEEDIMLITDQGVMI
RFSVEDVSQTGRATLGVHLIRMTDGAKVATMAKVEKQDDSEDDTKDQSSDSEQASDDSST
NADQNSDSDN
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaataaagataaccatgatgaaccaattgctggtcgagtgaccaacgttgatcta
tctaaaaaaatgcgaacgtcatttcttgactacgccatgagtgtcattgttgcccgtgcg
ctgcccgatgttcgtgatggtttaaagccggttcatcgtcgtattttgtatgatatgcat
gaattgggtgtgacacccgataagccttataagaaatcagccagaattgtcggcgatgtt
ttaggtaagtaccatccccatggagataccgccgtgtatgagtcaatggttcgaatggct
caggactttagttaccgttacatgttagttgatggtcacggaaactttggttcagttgat
ggtgatggcgctgcagcgatgcgttataccgaagcccggttaagcaagattgcgatggaa
atgctgcgtgatatcaacaaagataccatcgatttccagcccaactatgatgggactgaa
cgtgaaccaagcgttttgccgtcacgattcccgaacctgttagtcaacggtgcgtcagga
attgccgtagggatggcaactaatattccacctcacaatttgtccgaagtcatcagtgcc
attcatgttttgatgaagaaccctgatgccactacagcagatttgatggaggctttgcca
ggacctgattttccaaccggcggcgttgtcatgggtaaatccggtattcggaaagcctat
gaaaccggtaagggaaccattattgtccgcgccaaagttgaaattgaaggggaagccggc
ggcaaacagcgaatcattgccaccgaattaccttacatggtcaacaaggccaagttaatc
gaacggattgctgaattagcccgcgataagcggattgaaggcatcactgatattaacgat
gagtctgaccgtgaaggaatgcgggttgtgattgatgttcgtcgggatgcaagtgccgaa
gtcatcttgaacaatttgtacaaattaaccctgatgcagacttcatttagtttcaacatg
ttggcaattgtcaaaggcacgccgaagattttgagtttgaaagaaattttgaactattat
ctcgagcaccaagttgaagttattcaacgacggaccaagtatgagctgaacaaggctcag
gccagggctcacattctcgaagggttaaggattgcccttgaccacattgatgaaattatc
aaaattatccgtggttcacagacaggtgacgttgccaagaaccaattaatcgaaggcttt
ggtctggatgacaagcaggctcaagcgattttggacatgcgtctggttcggttaaccggt
ttggaacgcgaaaagattgataaagaatacaatcaattgatgaaggacattgaagaatac
aaagcgattcttgccagtcgtgaacgggtcaatgaaatcatttatcaagaattattggag
atccaaaacaaatttggcgatccacgacgaactgaactcttggtgggtgaagttctgagt
cttgaagatgaagatttaatcgaagaagaagacgtgatcatttctctaacgcataacgga
tacatcaaacggttaccaacttctgagtttaaagcccaaaatcgtggtggtcgtggtgtt
caaggaatgggtgttcataacgatgatttcgtagaacatttagtttcaacttcaacccac
gatgtgctgttgttcttcaccgatgccggtaaggtttatcggatgaagggttacgaaatt
cccgaatatggtcgttctgccaagggaattccagtgattaacctattgaacattggcaat
aacgaaaaaattcaggcagtgattaacgtttctgataagaacaacgatattgaaaaggat
cttttctttgtcactttgatgggaaccgttaagcgcaccccagtgtctgactttgccaac
atccgtagtaatggtctgaaagccattaacctcaaggatgatgatcaggttagcaacgtt
ctgattgccagtgaggatcaaaacattatcatcggaactcaccgtggctacgcggtcagc
tttaatgctgccgacgttcgttcgatgggacgatcagctaccggtgtccggggtgttaga
ttacgtgagaacgattatgtggtcggttctgatatcttgaaacctgacagtgaggtcttt
atcatttctgaaaatggctatggtaaacgcactccagctgctgaatacccaattaagggc
cggggcggtaaaggaattaagactgccaacatcactgaaaagaatgggccgcttgccggt
ttgacaacggttaacggtgaggaagacatcatgctgatcacagaccagggtgtcatgatt
cgattcagtgttgaggacgtttcgcaaacaggtcgggcaactctcggtgttcacttgatc
agaatgaccgatggcgctaaagttgcaaccatggctaaggttgagaagcaggatgattca
gaggatgacacaaaagatcagtcatctgattcagaacaagcaagtgatgattccagtacc
aatgccgatcaaaactcagattcagataattaa
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