Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_0108
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Entry
LBUCD034_0108 CDS
T02244
Symbol
cas2-1
Name
(GenBank) 3'-5' exonuclease and CRISPR-associated Cas2 family protein
KO
K09951
CRISPR-associated protein Cas2
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lbn02048
]
LBUCD034_0108 (cas2-1)
Prokaryotic defense system [BR:
lbn02048
]
CRISPR-Cas system
Universal Cas proteins
LBUCD034_0108 (cas2-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_Cas2CT1978
RNase_T
Rv2179c-like
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AFR99220
UniProt:
J9W4M1
LinkDB
All DBs
Position
125492..126382
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AA seq
296 aa
AA seq
DB search
MIVITLTKVPQSLRGDLTKWYQEVQTGVYVGNVSARIRDLLWERVIKGIGTGEATMVYST
NNELGYQIKTTRRQYQVVDFDGIPLMMRLNAETTPVKHGFSNASKFHKAKVMAHKVANKD
HHSAVHPLVAIDIETTGLDVTKDRIISIAAVKHSGDGDPISFQQLIQIDQPVPHQITELT
GILSEMLTEQGVSLESALASLRDFIQQFPVVGYNLHFDASFLSMAFRKLDQPDLSNQMVD
LMPVVKKVNQFLDNYRLETVLAEYHIKNSDPHRALADAKATLSLALKLIENGDLTI
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcattactttgactaaagtgcctcagtcgttacgaggtgatttgaccaagtgg
tatcaagaagtccagaccggggtttatgttggtaacgttagtgctcgaatccgggatttg
ctgtgggagcgggtcatcaaagggattggtaccggtgaagccaccatggtttatagcacc
aataatgaactgggttatcaaattaaaactaccaggagacagtatcaagttgttgatttt
gatgggattccgttgatgatgcgcttgaatgcggagacaactcccgtgaaacacgggttt
agcaatgcatcgaagtttcacaaagcgaaagtgatggcccacaaagtcgcgaacaaggac
caccattctgccgttcacccattggtcgccattgatattgaaaccaccggattggatgtt
accaaggatcgtattatttctattgcggctgtcaaacacagcggagatggggatcctatc
agcttccagcaactgattcaaattgatcagccggttccccatcagataaccgagttgacg
gggattttgtcagaaatgctgactgaacaaggcgttagcttggagtcggcactggcatcg
ctacgtgattttattcaacaatttccggttgttgggtataatttgcattttgatgcatca
tttctttctatggctttcaggaagcttgaccagcctgatttaagcaatcagatggttgat
ttgatgccggtggttaaaaaggttaaccaatttctggataattatcgcctggaaaccgtg
cttgcagaatatcacatcaaaaattctgacccccatcgtgcgttagccgatgcgaaggca
actttgtccttagcgttgaagttgattgaaaatggcgatttgacgatttga
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