KEGG   Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1122
Entry
LBUCD034_1122     CDS       T02244                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
lbn  Lentilactobacillus buchneri subsp. silagei CD034
Brite
KEGG Orthology (KO) [BR:lbn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lbn03016]
    LBUCD034_1122 (truB)
Enzymes [BR:lbn01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LBUCD034_1122 (truB)
Transfer RNA biogenesis [BR:lbn03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LBUCD034_1122 (truB)
 Prokaryotic type
    LBUCD034_1122 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 SF3b1
Other DBs
NCBI-ProteinID: AFS00163
UniProt: J9W0T6
LinkDB
Position
1108838..1109743
AA seq 301 aa
MDGVIALYKERGMTSHDCISKLRKILHTKKVGHTGTLDPNVDGVLPICIGQATKISELLM
QSGKVYRGAITLGVAYDSEDLDGHLIEQVPVKTPLTDEQINAALAQLTGDILQTPPMYSA
VKVNGHKLYEYARKGITIDRDPRRIRIDYFKQIKPATYDDAAHTQTIYFEVGCSKGTYVR
TLAVDFGKRVGLPSVMSDLTRIKSGGFDISQTSTLAQVKEAVAAEDLSIVLHPLSEALAE
YPGYQLDDSRWSIVSHGGFLDQSISPTHAPVVRLDYQQQVKALYRLDEQIGQYRPFRMFL
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atggatggcgtaattgcactatataaagaacgtggcatgacaagtcacgactgcatcagc
aagttaagaaaaattttgcacaccaaaaaagttggccataccggcaccttggatccaaat
gtcgatggggtgctgccaatttgtatcggccaggcgaccaagatcagtgaactgttaatg
cagtccggaaaagtatatcgcggtgcgattaccctgggagtcgcttatgatagtgaggat
ctggacggtcacttgattgaacaggtgccggttaaaacgccgttgacggatgaacagatt
aacgccgctctggctcaattgaccggtgacattctgcagacgccgccgatgtattcggcc
gtcaaagtcaatggccacaagctctatgaatatgcgcgcaaggggatcaccattgaccgg
gatccacgccggattcgtattgattattttaagcaaattaaaccagcaacgtatgatgac
gctgcccacacgcagacaatctattttgaagtcggctgttcaaaggggacttacgttaga
acgctggcagtagattttggaaaacgggttggcttgccgtctgtcatgtctgatctgacc
agaattaaaagcggtggttttgatatttcacagacatccactttggctcaagtcaaagaa
gccgttgctgcggaagacctgagtatcgtccttcatccgttatctgaagcactggcggaa
tatcccggttatcaattggatgacagccgctggtcaatcgtttctcatggcggtttcttg
gaccaatcaatcagtcctacccacgcgccggtagttcgattagattatcaacaacaggtg
aaggcattataccggttggacgaacaaatcggtcaatacagaccgtttagaatgttttta
gcttaa

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