Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1144
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Entry
LBUCD034_1144 CDS
T02244
Symbol
nfo
Name
(GenBank) K01151 deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Pathway
lbn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LBUCD034_1144 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbn03400
]
LBUCD034_1144 (nfo)
Enzymes [BR:
lbn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LBUCD034_1144 (nfo)
DNA repair and recombination proteins [BR:
lbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LBUCD034_1144 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Lyase_1
Motif
Other DBs
NCBI-ProteinID:
AFS00185
UniProt:
J9W593
LinkDB
All DBs
Position
1133384..1134304
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AA seq
306 aa
AA seq
DB search
MSETPFLIGSHVSMNGKDMFLGSAKEAASYGETVFMVYTGAPQNTVRKPIEKLNADAGKQ
YMSDHGLKAVVVHAPYIINLGNTFKPENFSFGVDFLRQEIQRAQAIGAKEIVLHPGAHVG
AGPQKAIDQIAKGLNEVIEENQHVQIALETMAGKGTEVGTSFEQLAEIIDKVSDNDKLSV
TFDTCHTSDAGYDIKNDFDGVLNQFDHIIGLDRLKVIHLNDSKNPQGSHKDRHQILGLGT
IGFDTLNYIAHHAQLKSVPKIMETPILKDPDNKNVKWNPHGYEVAMLKKQQFNPNIIEDM
KARKPY
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacaccatttttaatcggttctcatgtcagtatgaacggcaaggacatgttc
ctcgggtctgccaaagaggcggcttcctacggtgaaaccgtctttatggtttatactgga
gcgccgcaaaatacggttcgtaaacccattgagaagttgaatgccgatgccggcaagcag
tatatgtccgatcatggcctcaaagcggttgtggtccatgcgccttatatcatcaacctg
gggaacactttcaaaccggaaaacttcagttttggtgttgattttttgcggcaggaaatt
caacgtgcacaagccattggggctaaagaaattgtgctgcatcccggcgctcacgttggt
gccggtccgcaaaaagcgatcgatcaaattgccaagggcttaaatgaagtgattgaggag
aatcaacacgtccaaattgctttggaaaccatggctggcaaaggtaccgaagttgggacg
tcatttgagcagttggctgaaattatcgataaggtcagcgataatgacaaactctccgtg
accttcgacacctgtcataccagcgatgccggttatgatattaaaaatgactttgatgga
gtcttgaatcaatttgaccacatcatcggccttgaccggctcaaagttattcacctgaac
gattccaaaaatccacagggcagccataaagaccgccatcaaattcttgggttggggaca
attggctttgataccctgaactatattgcccatcacgcacaattaaaaagcgttcccaaa
attatggaaacgccaattttgaaggatcctgacaataaaaacgttaagtggaatcctcat
ggttatgaagttgcaatgctgaaaaaacagcagtttaatcccaacattattgaagatatg
aaagccagaaaaccttactag
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