Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1270
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Entry
LBUCD034_1270 CDS
T02244
Symbol
priA
Name
(GenBank) primosomal protein N' (replication factor Y) (superfamily II helicase)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Pathway
lbn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LBUCD034_1270 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbn03400
]
LBUCD034_1270 (priA)
Enzymes [BR:
lbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LBUCD034_1270 (priA)
DNA repair and recombination proteins [BR:
lbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LBUCD034_1270 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
PIF1
AAA_19
UvrD-helicase
DAP3
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AFS00310
UniProt:
J9W5N9
LinkDB
All DBs
Position
complement(1269102..1271501)
Genome browser
AA seq
799 aa
AA seq
DB search
MQVAQVIVDVPARQTNSPFSYSIPDHLADQIQPGMRVQVPFGNRKITGFVVGLSDSSSFN
GKLKPIADLIDLYPVVNSELLNLAEWLADQTYSFKISCLQTMLPGGMRTKNQKKLIAKNE
QVCQQYPEIFQGQPEVEYDRQKYNNQVLAEILNLQKAGDIQVEYDLTNHARPIMRKAYRG
QLNDAQIADALKTVRKNARGQIQLLNLLKTHQNDTLLVSKWASLGVTSATLKAAEKKGWV
TSTLKRHVRNPFLRDVAPSQPFKLQPDQQAAVDSIEQAVVHKKDQVFLLEGVTGSGKTEV
YLQSIAHALELGRTALMLVPEITLTPQIVGRIRSRFGDQVAMLHSAMSSGERYDEWQRIN
QGKAKVVVGVRSAVFAPLSNIGLIIMDEEHDSSYKQADNPRYQTRDVAKWRAAYNNCPVV
LGSATPSLESRARAMKGVYTLLKLPHRINQHALPHVSIIDMKTELAKHHSALSTKLADAI
QVRLDKHEQVILLLNRRGYSAFLMCRDCGYVPRCPNCDISLTMHKNTHTLNCHYCGHKEP
VPTVCPQCHSKRIRFYGMGSEQLEEQVKDMFPTARVLRMDVDTTRKKGSHEAIIDQFGAH
KADILLGTQMIAKGLDFPEVTLVGVLNADSALQFPDFRSSERTFELLTQVSGRSGRADKT
GEVIIQTFNPDHYAIQLAKTQDYEKFYATEMRVRHDGKYPPYYYTVKLTGNSPSENQTAS
EMFGIMNFLKKQLSPQAIILGPTPKTITRIDNRYYYQIIIKYRKEPQLKATLDEILVQSQ
KKQRQGLQIAIDNEPLDFM
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggttgctcaagttattgttgacgtcccagcacgccaaaccaacagtccgttcagc
tattcgattccagatcatttagcggatcaaattcaacctggcatgcgcgtccaggtccct
tttggcaaccgcaaaattactgggtttgtggttggcctttccgacagttccagcttcaac
ggcaagctcaaaccgattgccgacctgattgatttatacccagtcgttaattctgagtta
cttaacttggctgagtggctggctgatcaaacctattcctttaaaatcagctgtttacaa
accatgctcccaggtggaatgcggactaagaaccaaaagaaactaattgccaaaaatgaa
caagtttgccagcagtatccggaaatcttccaaggacagccagaagtcgaatatgaccgc
cagaaatataataatcaggttttagcagagattttaaatctgcagaaagccggcgatatt
caagttgagtatgatctcaccaaccacgcccggccaattatgcgaaaagcttatcgaggc
caattaaatgacgcccagattgctgacgccctcaaaaccgtacggaaaaatgctcgtgga
caaattcaattgttaaacctgctcaagacccatcaaaacgatacactgctagtttccaaa
tgggcgtcccttggagtgaccagcgccactttgaaagctgccgaaaagaaggggtgggtg
acttcaacattgaagcgccatgttcgcaacccatttctcagagatgtcgcccccagtcag
ccgtttaagttacagcctgatcaacaagcagcagtcgattcgattgaacaggcggtcgtc
cacaaaaaagatcaggtctttttattggaaggcgtcaccggttctggaaaaaccgaagtt
tacctgcagtcaattgcccacgcgctggaactggggcggacggcgttgatgctggtgccc
gaaattaccttgacccctcaaattgttggccgcattcgcagccggtttggtgatcaagtg
gcgatgcttcatagtgcgatgtcttccggcgaacgctacgatgaatggcagcggattaac
caagggaaagccaaagtggtcgttggggttcgctcagccgtatttgccccgctcagcaat
attggcttaatcattatggacgaggagcatgacagcagctacaaacaagccgacaacccc
cgctaccaaacccgagatgtcgccaaatggcgggctgcctacaataattgccccgtggta
ctgggaagtgccactccatcgctggaatcccgtgcacgggcaatgaagggtgtctataca
ctgttaaagctgccgcatcgcatcaatcagcatgctttaccgcatgtttcgattattgat
atgaagactgaactggcaaaacaccacagtgcactatcgacaaaattggccgatgcgatc
caggttcgcctcgacaaacatgagcaagtgattttattgctgaatcgccgcggttattct
gcctttttgatgtgtcgggactgcgggtacgttcctcggtgccccaactgcgatatttcg
ctgacgatgcacaaaaatacacatactcttaattgtcattattgcggccacaaagaaccg
gtgccaactgtctgcccacaatgccacagtaaacggattcgcttttatggcatgggcagt
gagcagcttgaagaacaggtcaaagacatgtttccaaccgccagagttctgcgaatggat
gttgataccacccgtaaaaaggggtcccatgaggcgattattgatcaatttggcgctcac
aaggcggatattttgctgggaacgcaaatgattgccaaaggattggattttcctgaggtc
actttggtcggcgtcttaaacgcagattcagcgttgcagtttccagattttcgatcaagc
gaacggacttttgaactccttacgcaggtctcaggccgctcggggagagccgacaaaacc
ggggaggtcatcatccagacctttaaccctgatcattatgcgattcaattggccaaaacg
caggattacgagaagttttacgccaccgaaatgcgtgtccgtcacgatggcaaatatcca
ccgtactactatacggttaagttaaccggcaattctcccagtgagaatcaaacggcttca
gagatgtttgggattatgaactttttaaaaaaacagctatccccacaggcaatcattctc
ggcccaacgccaaaaacgattacccgaattgacaaccgttactattaccaaatcattatc
aagtatcgaaaggaacctcagttaaaggccactttagacgagattttagtccagtcacaa
aaaaagcagcgtcaaggcctccaaattgcaattgataatgagccgctggactttatgtaa
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