Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1341
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Entry
LBUCD034_1341 CDS
T02244
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Pathway
lbn03030
DNA replication
lbn03410
Base excision repair
lbn03420
Nucleotide excision repair
lbn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBUCD034_1341 (polA)
03410 Base excision repair
LBUCD034_1341 (polA)
03420 Nucleotide excision repair
LBUCD034_1341 (polA)
03440 Homologous recombination
LBUCD034_1341 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbn03032
]
LBUCD034_1341 (polA)
03400 DNA repair and recombination proteins [BR:
lbn03400
]
LBUCD034_1341 (polA)
Enzymes [BR:
lbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBUCD034_1341 (polA)
DNA replication proteins [BR:
lbn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LBUCD034_1341 (polA)
DNA repair and recombination proteins [BR:
lbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LBUCD034_1341 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LBUCD034_1341 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AFS00378
UniProt:
J9W1J9
LinkDB
All DBs
Position
complement(1330891..1333545)
Genome browser
AA seq
884 aa
AA seq
DB search
MTKKLLLIDGNSIAFKAFYALYTAMDKFTNPSGLHTSAIYGFNRMLDKVLADEKPTDVLV
AFDAGKTTFRTKMYADYKGGRAKTPTELSEQFPFLKELINARGISTYELPDYEADDIIGT
LAKKAEEAGDYQVVIVTGDRDLTQLTSDKTTVQVSKKGVTELETYTPKHVEEKLGVKPSQ
IIEIKGLKGDNSDNYPGVEKVGDKTAVRLVQQFGTIDNLYQNIDQVSGKKLKEHLIHDQA
QAERAHTLATINRDAPVTVSLDQLKYQGDNIDKLTDFYERMGFKSFLAKLSVDDQDHADD
QADIQYTVLSAKNAAELDQFTDEVTFHLEMSEENYHTSPLVGFAIGQGDKWYVTNDPELL
HNQHVIDLLTSKTIKKNVFDAKRTYVGLYRQGIELANVDFDMLLVSYLLNTTNNSNDVGT
VAHLHGFYNVKTDEEVYGKGAKRHIDPQSPAFLAHLVHKVKAIDALHDGMFKDLDAHNQS
KLYWDIEIKIAFVLAHMEINGIKVDAATLEGMGSKFKERLAEIEQTIFQEAGEEFNIGSP
KQLGKILFEKLRLPILKKTKTGYSTSVDVLEKLAPDAPIVQNVLDYRQISKLQSTYVDGL
LKVIHPDDSKVHTRYLQTLTQTGRLSSVDPNLQNIPVRSEEGRLIRQAFIPSHPGWQIFS
SDYSQIELRVLASITDDQNMQDAFKNGEDIHATTARRIFGLPSNEEVTPELRRQAKAVNF
GIVYGISDFGLASNTGITRKQAHQFIERYFEEYPGVKKYTEDIVEFARNHRYVETIAHRR
RYLPDINSKSFNLRSFAERTAMNTPIQGSAADIIKIAMINMADAIKDMKTRMLLQVHDEL
IFEVPDEELDTVKQLIPSVMDSAIHLNVPLKVESHWGKTWYDAK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaaattattattaattgatggtaatagtattgccttcaaagcgttttatgct
ttatacacggccatggacaaatttaccaatccatctggcctacataccagcgccatctat
ggctttaaccggatgctggacaaagtattagcagacgagaagcccaccgatgtgctggtc
gcatttgacgccggcaaaaccacttttcgaacgaaaatgtacgctgattataagggtggt
cgggcaaagacaccaactgaactttccgagcaatttcccttcttaaaagaattaattaat
gcccgtggcatctccacctatgaattaccggattatgaggccgatgatattattggaacg
ctcgccaaaaaggctgaagaagctggtgactaccaagttgtgattgtcactggcgatcga
gatttgacccagttaacttcagataagaccacggttcaggtttctaaaaagggcgtcacc
gaactggaaacatatacccccaaacacgtcgaagaaaagttgggtgttaaaccgagccag
attattgaaattaagggtctgaaaggtgacaactccgacaactatcccggcgttgaaaaa
gtcggtgacaagacagctgtcaggctggttcaacaatttggcacgattgacaatctctat
caaaatatcgaccaggtttccggtaaaaaattaaaggaacatttgattcatgaccaagcc
caggccgagcgcgcccacacgttggcaacaatcaaccgcgacgcgccggtaacagtctct
ttggatcagttgaagtatcagggagacaatatcgataaactgaccgatttttacgagcga
atgggcttcaaatcgtttctggccaagttatcagttgatgatcaggatcatgccgatgat
caggcagatattcaatacactgtcttgtccgccaagaatgcggctgagctggatcagttc
acagatgaagtgacttttcacctggaaatgtcagaagaaaactaccacacatcgccgttg
gttggctttgcgattggacagggtgacaaatggtatgtgaccaacgatcctgaattgctt
cacaatcagcatgtcattgaccttttgaccagcaagactatcaaaaagaatgtctttgat
gccaaacgaacctatgtcggtctttatcgacaagggattgagcttgccaacgtggacttc
gatatgctgctggtatcatatttgcttaatacaactaataatagcaacgacgtcggcacc
gttgcccatttacacggattctataatgttaaaaccgatgaagaagtctatggaaagggt
gccaagcgacacattgacccgcaatcacctgcctttttggcccatttggttcataaggtc
aaagcgattgatgctcttcacgacgggatgtttaaggatctggatgcccataatcaatcc
aaactgtactgggatatcgaaatcaagattgcctttgtccttgcccacatggaaatcaat
ggcatcaaagttgatgcagccactttggagggcatgggcagtaaatttaaagagcggctg
gctgaaattgaacagaccattttccaagaagctggtgaagaatttaacattggttctccc
aaacaactgggaaagattctgtttgaaaagctccgcctgccgattctaaagaagaccaaa
accggttattcgacctcagttgacgtgttggagaaattggctccggatgcgccaattgtt
caaaacgtgttggactaccgccagatttccaaactacagtcgacatatgttgatgggcta
ttaaaggtcattcatccagatgattccaaagttcacaccagatatctgcagacgttaact
cagactggtcgattgtcttcagtcgatcccaatctgcagaatatcccggttcgctccgag
gaaggccgacttattcgccaggcgttcattccatcacatcccggttggcagattttctcc
tctgattattctcaaattgaactgcgggtgttggcgtcaattaccgacgaccaaaatatg
caggacgcctttaaaaacggcgaggatattcatgccaccacggcacggagaatttttggg
ctgccgtcaaatgaagaagtcaccccggaacttcggcgtcaggccaaggcagttaacttt
gggattgtttatgggattagcgattttggtttagcgtccaataccggcattaccagaaaa
caggcgcatcagtttattgaacgttattttgaagaatatcccggagttaaaaaatatacc
gaagacatcgttgaatttgcccgtaaccaccgctacgttgagacgattgcccatcgacgc
cgttatttgccggatattaattccaagagctttaatctgcgttcattcgctgaacggact
gccatgaacacaccaatccaaggcagtgcggccgatatcatcaaaattgcgatgattaat
atggccgatgcaatcaaggatatgaaaacccgcatgctgctgcaggttcacgatgaatta
atttttgaagttcctgacgaggaattggacaccgtcaaacaactgattccaagcgtcatg
gattcagcgatccacttgaatgtgccattaaaagttgaaagccactggggtaagacctgg
tatgatgcaaaataa
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