Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1354
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Entry
LBUCD034_1354 CDS
T02244
Name
(GenBank) 3'-5' exoribonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbn03019
]
LBUCD034_1354
Messenger RNA biogenesis [BR:
lbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LBUCD034_1354
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Ins_allergen_rp
DUF1678
Motif
Other DBs
NCBI-ProteinID:
AFS00391
UniProt:
J9W8B8
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All DBs
Position
complement(1344043..1345029)
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AA seq
328 aa
AA seq
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MAKQLMDIKLDEEFEMYVLLKDASKRVAKNGKPFLSLVFQDQSGQISGKYWDASPTDVEQ
FVSGKVVLLKGKRENYMNSPQIKILAMRLANQSEPHDPVNFVKRAGMSRDQMEEYIDQTI
FEITNATYNRIVRSLISKHANAFYTFPAAKSNHHDFAGGLAFHTISILKLAHSIVNQYEG
INAPLLYAGAILHDLGKTIELSGPIATEYTLAGNLLGHLSIMDAEIVEAADKLGIDPKSQ
DLILLRHMILSHHGLLEYGSPERPKILEAEILHHLDELDATIMMIQSATKNVEPGQFSDR
VFGLDNRRFYKPEKSVDPKQKPTQGELL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaattgatggatatcaagttggatgaagaatttgagatgtatgtcttacta
aaagacgcctccaagcgggtggctaaaaatggtaagccatttctgtcgttggtctttcaa
gatcagtccggccaaatctcaggcaaatactgggatgcctcgccaacagatgtggagcag
tttgtttcaggcaaagtcgttctgctgaaaggtaagcgggagaactatatgaattctccc
caaatcaagattctggcaatgcggctggccaaccaaagtgagccccacgatccggttaat
tttgtcaaacgggcggggatgtctcgcgatcagatggaagaatacattgaccaaaccatc
tttgagattaccaacgcaacctataatcgaatcgtccgcagtttgatttccaagcacgcc
aacgcgttttatacctttccagccgcaaaatccaatcaccatgattttgccggggggcta
gcttttcacaccatttcaattctcaaactggcccattcgatcgtgaatcagtatgagggc
attaatgccccattattgtacgcaggggccattttacatgatctgggtaaaaccattgag
ctgtccggtccaattgccacagagtacaccttagcagggaatctgttaggacatctcagc
attatggatgccgagatcgttgaagcggctgacaagttgggaattgatcccaaatcccag
gatctgattttactgcggcatatgattctgtcgcaccacggattactggagtatggttca
ccggaacggccgaagatattggaggcagaaattctgcatcatttggatgagttagatgcg
acgattatgatgattcaaagcgccactaagaatgtcgaacccggccaattcagtgatcgg
gtctttggattggataatcgacgattctacaaacctgagaaatcagttgaccccaaacaa
aaaccgacccaaggggaattgttataa
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