Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1433
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Entry
LBUCD034_1433 CDS
T02244
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Pathway
lbn03030
DNA replication
lbn03430
Mismatch repair
lbn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBUCD034_1433 (dnaQ)
03430 Mismatch repair
LBUCD034_1433 (dnaQ)
03440 Homologous recombination
LBUCD034_1433 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbn03032
]
LBUCD034_1433 (dnaQ)
03400 DNA repair and recombination proteins [BR:
lbn03400
]
LBUCD034_1433 (dnaQ)
Enzymes [BR:
lbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBUCD034_1433 (dnaQ)
DNA replication proteins [BR:
lbn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LBUCD034_1433 (dnaQ)
DNA repair and recombination proteins [BR:
lbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LBUCD034_1433 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
DEDDh_C
RNase_H_2
MCLN_ECD
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
AFS00463
UniProt:
J9W1S7
LinkDB
All DBs
Position
1422383..1422916
Genome browser
AA seq
177 aa
AA seq
DB search
MNFVAMDFETANAKRASACSIALAIVRDNQITNEFYSLINPEMDFSWRNINVHGIHERDV
VDAPTFPEVWRHIQPLFSANKLVIAHNASFDNSVLKRTLERYEVQPPHYLTLDTLRTSKQ
FYPTLENHKLNTLCDKLNIVLEHHHNALDDSVACANILLTEQAQFGSDMLRPFVKAI
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgttgcgatggatttcgaaaccgcaaacgcaaaaagagccagcgcatgttca
attgcactggccatcgttcgagataatcaaatcactaacgaattttattcattaatcaat
ccggaaatggactttagttggcgaaatatcaacgtccatggcattcatgaacgtgatgtt
gtcgatgccccgacctttccggaagtttggcgccacattcaaccgctgttttcagccaat
aaattggtgattgcccacaacgcatcatttgataacagcgtcttgaaacgaacactggaa
cgttatgaagttcaaccgccgcactatctgacactggacacgttaaggacctccaagcaa
ttctacccgacgttggaaaatcacaaacttaacaccctttgcgataagctcaacatcgtt
ttggaacatcaccataacgcgctggacgatagtgttgcctgtgccaatattctattaacc
gaacaggcccaatttggcagcgatatgctccggccatttgtcaaagcaatctaa
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