Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1437
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Entry
LBUCD034_1437 CDS
T02244
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Pathway
lbn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LBUCD034_1437 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbn03400
]
LBUCD034_1437 (ung)
Enzymes [BR:
lbn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LBUCD034_1437 (ung)
DNA repair and recombination proteins [BR:
lbn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LBUCD034_1437 (ung)
Prokaryotic type
LBUCD034_1437 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFS00467
UniProt:
J9W4A9
LinkDB
All DBs
Position
complement(1425156..1425848)
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AA seq
230 aa
AA seq
DB search
MKPFIKNDWWDVLKPEFEKTYYQQLRQFLISEYKTQYIHPDMNHIFEAFQLTPFSKVKVV
ILGQDPYHEPHQAQGLSFSVMPGVKIPPSLQNIYKELQSDLGIKPVEHGDLESWAKQGVL
LLNSVLTVRNGQAFSHKGKGWEQLTDAAIQKLSAREKPVVFILWGRAARDKIALIDTKTN
VVIQSAHPSPLSAHRGFFGSKPFSKTNEALEAMGEEPINWQLPEKVSQTS
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgtttataaaaaatgactggtgggatgttttaaagcccgaatttgagaaaact
tattatcagcagttacgccaatttttgatatcagaatacaagacgcaatatattcatcct
gatatgaatcacatttttgaggcgtttcagctgacccctttcagcaaggtaaaggtcgtg
attttgggacaggatccctatcatgagcctcatcaagcccagggattgagtttttctgtc
atgccgggcgttaaaattccaccgtcacttcagaatatttataaggagcttcagtctgac
ctcggaatcaaaccggttgaacacggtgatttggaaagctgggccaaacagggcgtatta
ctgctgaattcagttttgaccgttcgcaatggccaggccttttcccacaaagggaagggt
tgggagcaactgactgatgcggccatccaaaaactgtccgctcgtgagaagcccgttgtc
tttattctgtgggggagagctgcccgagataagattgcgttgattgatacgaagaccaac
gtggtgattcaatcggcccatcccagtccattgtctgctcatcgaggattctttggttcg
aaaccattttcaaagaccaatgaagcactggaagcaatgggcgaggagccgattaactgg
cagctgccggaaaaggtatcgcaaacatcttag
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